Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1142

Experiment: 2-Furfuraldehyde 0.05 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.05 vol%
1,239,359	+		Psest_1141	0.36	+1.3
1,239,360	-		Psest_1141	0.36	+1.3
1,239,360	-		Psest_1141	0.36	-2.1
1,239,360	-		Psest_1141	0.36	+1.5
1,239,362	-		Psest_1141	0.36	-0.8
1,239,362	-		Psest_1141	0.36	-1.6
1,239,362	-		Psest_1141	0.36	+0.1
1,239,419	+		Psest_1141	0.42	+0.3
1,239,419	+		Psest_1141	0.42	+0.7
1,239,419	+		Psest_1141	0.42	+0.3
1,239,420	-		Psest_1141	0.42	-1.1
1,239,422	+		Psest_1141	0.42	+0.6
1,239,422	+		Psest_1141	0.42	+2.1
1,239,422	+		Psest_1141	0.42	-0.7
1,239,422	+		Psest_1141	0.42	-0.0
1,239,422	+		Psest_1141	0.42	-1.2
1,239,422	+		Psest_1141	0.42	+1.9
1,239,422	+		Psest_1141	0.42	-1.7
1,239,423	-		Psest_1141	0.42	-0.7
1,239,423	-		Psest_1141	0.42	+1.4
1,239,423	-		Psest_1141	0.42	-1.1
1,239,423	-		Psest_1141	0.42	+1.0
1,239,423	-		Psest_1141	0.42	-0.0
1,239,423	-		Psest_1141	0.42	-1.3
1,239,423	-		Psest_1141	0.42	+0.1
1,239,423	-		Psest_1141	0.42	-1.9
1,239,688	+		Psest_1141	0.70	+1.2
1,239,728	+		Psest_1141	0.74	-0.5
1,239,728	+		Psest_1141	0.74	+2.4
1,239,728	+		Psest_1141	0.74	+0.4
1,239,728	+		Psest_1141	0.74	-2.7
1,239,729	-		Psest_1141	0.74	-0.7
1,239,729	-		Psest_1141	0.74	-1.0
1,239,729	-		Psest_1141	0.74	+0.6
1,239,729	-		Psest_1141	0.74	-1.7
1,239,729	-		Psest_1141	0.74	+0.1
1,239,729	-		Psest_1141	0.74	+1.0
1,239,729	-		Psest_1141	0.74	+2.1
1,239,735	-		Psest_1141	0.75	+1.3
1,240,052	+				-1.2
1,240,052	+				-0.3
1,240,054	+				+0.7
1,240,054	+				+1.2
1,240,054	+				-0.9
1,240,055	-				-0.5
1,240,055	-				-1.9
1,240,055	-				-1.0
1,240,055	-				-1.1
1,240,115	+				+0.2
1,240,115	+				+0.5
1,240,115	+				-0.1
1,240,119	+				+1.4
1,240,119	+				+0.7
1,240,119	+				+1.3
1,240,120	-				-1.6
1,240,120	-				-1.3
1,240,458	+		Psest_1142	0.68	+1.7
1,240,458	+		Psest_1142	0.68	-2.3
1,240,458	+		Psest_1142	0.68	+0.8
1,240,458	+		Psest_1142	0.68	+1.0
1,240,458	+		Psest_1142	0.68	+1.2
1,240,483	+		Psest_1142	0.73	+2.6
1,240,484	-		Psest_1142	0.73	+0.3
1,240,642	+				-1.9
1,240,643	-				+0.5
1,240,643	-				-2.5
1,240,697	+				-0.7
1,240,697	+				+0.5
1,240,697	+				-0.9
1,240,698	-				-1.5
1,240,722	+				-1.2
1,240,961	-		Psest_1143	0.31	-0.0
1,241,027	+		Psest_1143	0.39	+0.7
1,241,108	+		Psest_1143	0.49	-1.8
1,241,109	-		Psest_1143	0.49	+0.3
1,241,144	+		Psest_1143	0.53	+1.4
1,241,145	-		Psest_1143	0.53	+1.2
1,241,145	-		Psest_1143	0.53	-0.1
1,241,268	+		Psest_1143	0.68	-0.2
1,241,269	-		Psest_1143	0.68	-0.8
1,241,299	+		Psest_1143	0.72	+0.4
1,241,299	+		Psest_1143	0.72	-0.2
1,241,300	-		Psest_1143	0.72	+3.6
1,241,300	-		Psest_1143	0.72	-2.0
1,241,300	-		Psest_1143	0.72	-0.8
1,241,300	-		Psest_1143	0.72	-1.3
1,241,300	-		Psest_1143	0.72	-1.5
1,241,507	-				+0.7