Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1111
Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.05 vol% |
---|---|---|---|---|---|
remove | |||||
1,204,689 | - | +0.5 | |||
1,204,689 | - | +1.3 | |||
1,204,770 | - | +1.9 | |||
1,204,770 | - | -1.6 | |||
1,204,808 | + | Psest_1111 | 0.11 | +0.8 | |
1,204,896 | + | Psest_1111 | 0.16 | -1.4 | |
1,204,896 | + | Psest_1111 | 0.16 | -1.7 | |
1,204,896 | + | Psest_1111 | 0.16 | -2.5 | |
1,205,070 | + | Psest_1111 | 0.26 | +0.1 | |
1,205,071 | - | Psest_1111 | 0.26 | +2.9 | |
1,205,071 | - | Psest_1111 | 0.26 | -1.3 | |
1,205,176 | - | Psest_1111 | 0.32 | +0.1 | |
1,205,380 | - | Psest_1111 | 0.44 | +2.6 | |
1,205,425 | - | Psest_1111 | 0.46 | +1.7 | |
1,205,575 | - | Psest_1111 | 0.55 | +0.1 | |
1,205,667 | - | Psest_1111 | 0.60 | -1.0 | |
1,206,363 | + | -2.4 | |||
1,206,510 | + | +0.5 |
Or see this region's nucleotide sequence