Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0786

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
858,457	+		Psest_0785	0.37	+0.1
858,581	-		Psest_0785	0.51	+0.4
858,581	-		Psest_0785	0.51	-2.2
858,962	-				+1.6
858,962	-				+0.9
858,962	-				+0.1
858,962	-				+1.6
859,077	+				+0.7
859,078	-				+0.7
859,384	+				+0.0
859,821	+		Psest_0786	0.44	-1.0
859,821	+		Psest_0786	0.44	-0.1
859,821	+		Psest_0786	0.44	+1.1
859,821	+		Psest_0786	0.44	+2.8
859,821	+		Psest_0786	0.44	+0.1
859,822	-		Psest_0786	0.44	-1.0
859,822	-		Psest_0786	0.44	-1.9
859,822	-		Psest_0786	0.44	+0.3
860,079	+		Psest_0786	0.69	+1.3
860,079	+		Psest_0786	0.69	+0.7
860,079	+		Psest_0786	0.69	+0.6
860,079	+		Psest_0786	0.69	+1.2
860,079	+		Psest_0786	0.69	+2.3
860,079	+		Psest_0786	0.69	+0.2
860,079	+		Psest_0786	0.69	-1.1
860,079	+		Psest_0786	0.69	+1.4
860,079	+		Psest_0786	0.69	+0.3
860,079	+		Psest_0786	0.69	-0.1
860,079	+		Psest_0786	0.69	-0.5
860,079	+		Psest_0786	0.69	-1.2
860,079	+		Psest_0786	0.69	+0.5
860,079	+		Psest_0786	0.69	-0.5
860,079	+		Psest_0786	0.69	+1.0
860,079	+		Psest_0786	0.69	-1.1
860,079	+		Psest_0786	0.69	-1.3
860,079	+		Psest_0786	0.69	-1.1
860,080	-		Psest_0786	0.69	+2.0
860,080	-		Psest_0786	0.69	-1.2
860,080	-		Psest_0786	0.69	-1.3
860,080	-		Psest_0786	0.69	-3.4
860,080	-		Psest_0786	0.69	-0.6
860,080	-		Psest_0786	0.69	-0.7
860,080	-		Psest_0786	0.69	+0.0
860,080	-		Psest_0786	0.69	+1.0
860,080	-		Psest_0786	0.69	-0.5
860,080	-		Psest_0786	0.69	+0.7
860,080	-		Psest_0786	0.69	-0.8
860,080	-		Psest_0786	0.69	+1.7
860,080	-		Psest_0786	0.69	-2.6
860,080	-		Psest_0786	0.69	+0.3
860,080	-		Psest_0786	0.69	-1.0
860,080	-		Psest_0786	0.69	+1.2
860,080	-		Psest_0786	0.69	+1.0
860,080	-		Psest_0786	0.69	+0.9
860,080	-		Psest_0786	0.69	-0.0
860,080	-		Psest_0786	0.69	+0.6
860,080	-		Psest_0786	0.69	-0.6
860,080	-		Psest_0786	0.69	-1.5
860,080	-		Psest_0786	0.69	-0.2
860,080	-		Psest_0786	0.69	+1.4
860,080	-		Psest_0786	0.69	+0.3
860,105	-		Psest_0786	0.71	-1.3
860,105	-		Psest_0786	0.71	-0.5
860,105	-		Psest_0786	0.71	+1.6
860,112	+		Psest_0786	0.72	+0.1
860,112	+		Psest_0786	0.72	-0.5
860,112	+		Psest_0786	0.72	-0.9
860,112	+		Psest_0786	0.72	-0.9
860,112	+		Psest_0786	0.72	+0.6
860,112	+		Psest_0786	0.72	-0.2
860,112	+		Psest_0786	0.72	+0.8
860,112	+		Psest_0786	0.72	-0.4
860,112	+		Psest_0786	0.72	+0.3
860,112	+		Psest_0786	0.72	-1.0
860,112	+		Psest_0786	0.72	-0.3
860,112	+		Psest_0786	0.72	+0.0
860,112	+		Psest_0786	0.72	-2.5
860,112	+		Psest_0786	0.72	-1.2
860,112	+		Psest_0786	0.72	+0.1
860,112	+		Psest_0786	0.72	-1.8
860,112	+		Psest_0786	0.72	-1.7
860,112	+		Psest_0786	0.72	+0.4
860,113	-		Psest_0786	0.72	+0.1
860,113	-		Psest_0786	0.72	-0.4
860,113	-		Psest_0786	0.72	+1.2
860,113	-		Psest_0786	0.72	-0.8
860,113	-		Psest_0786	0.72	+1.2
860,113	-		Psest_0786	0.72	-1.4
860,113	-		Psest_0786	0.72	-0.9
860,113	-		Psest_0786	0.72	-1.6
860,113	-		Psest_0786	0.72	-0.1
860,113	-		Psest_0786	0.72	+0.9
860,113	-		Psest_0786	0.72	-2.1
860,113	-		Psest_0786	0.72	-0.3
860,113	-		Psest_0786	0.72	-0.7
860,113	-		Psest_0786	0.72	-0.3
860,113	-		Psest_0786	0.72	+0.2
860,113	-		Psest_0786	0.72	+0.5
860,113	-		Psest_0786	0.72	+1.3
860,113	-		Psest_0786	0.72	-2.3
860,161	+		Psest_0786	0.77	-0.6
860,161	+		Psest_0786	0.77	+0.4
860,162	-		Psest_0786	0.77	-0.0
860,268	-		Psest_0786	0.87	-1.4
860,268	-		Psest_0786	0.87	+0.4
860,562	+				+0.6
860,566	-				-2.1
860,766	+				+0.4
860,766	+				-1.0
860,766	+				+1.5
860,766	+				-2.1
860,766	+				+0.3
860,766	+				-0.7
860,767	-				-0.2
860,767	-				-0.6
860,767	-				-1.3
860,767	-				-1.3
860,767	-				-0.1
860,767	-				-0.9
860,767	-				-0.8
860,767	-				-0.1
860,767	-				+1.6
860,767	-				+0.5
860,802	+				+0.3
860,958	+		Psest_0787	0.20	-1.8
861,057	+		Psest_0787	0.29	+0.0
861,058	-		Psest_0787	0.30	+0.2
861,058	-		Psest_0787	0.30	-0.1
861,058	-		Psest_0787	0.30	-1.1
861,058	-		Psest_0787	0.30	+0.4
861,180	+		Psest_0787	0.42	+0.2
861,352	-		Psest_0787	0.59	+0.0