Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3926

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
4,095,126	-		Psest_3925	0.71	+0.0
4,095,127	+		Psest_3925	0.71	+1.5
4,095,127	+		Psest_3925	0.71	-1.7
4,095,127	+		Psest_3925	0.71	+0.3
4,095,322	+		Psest_3925	0.83	+0.1
4,095,323	-		Psest_3925	0.83	+0.7
4,095,323	-		Psest_3925	0.83	+0.6
4,095,323	-		Psest_3925	0.83	-0.2
4,095,446	-				-1.3
4,095,446	-				-1.8
4,095,686	+				-1.1
4,095,687	-				-0.5
4,095,687	-				+0.4
4,095,693	+				+0.9
4,095,757	+				+1.1
4,095,758	-				+0.2
4,095,786	-				-1.1
4,095,823	+				-2.5
4,095,856	+				+3.7
4,095,856	+				-1.5
4,095,856	+				-0.1
4,095,857	-				+0.1
4,095,857	-				-0.1
4,096,003	+				-0.9
4,096,003	+				+0.4
4,096,003	+				-0.6
4,096,003	+				+0.4
4,096,004	-				+0.3
4,096,004	-				-1.2
4,096,004	-				+0.0
4,096,004	-				+1.0
4,096,004	-				-0.4
4,096,004	-				-0.2
4,096,219	+		Psest_3926	0.14	+2.4
4,096,219	+		Psest_3926	0.14	+1.2
4,096,219	+		Psest_3926	0.14	-1.6
4,096,219	+		Psest_3926	0.14	-0.1
4,096,220	-		Psest_3926	0.14	+0.9
4,096,220	-		Psest_3926	0.14	+2.5
4,096,220	-		Psest_3926	0.14	+2.4
4,096,279	+		Psest_3926	0.18	+2.8
4,096,453	+		Psest_3926	0.27	-0.9
4,096,453	+		Psest_3926	0.27	+2.3
4,096,453	+		Psest_3926	0.27	+1.5
4,096,453	+		Psest_3926	0.27	+2.3
4,096,453	+		Psest_3926	0.27	+1.5
4,096,453	+		Psest_3926	0.27	+1.5
4,096,454	-		Psest_3926	0.27	+1.9
4,096,454	-		Psest_3926	0.27	+1.6
4,096,454	-		Psest_3926	0.27	+0.8
4,096,454	-		Psest_3926	0.27	+3.8
4,096,576	+		Psest_3926	0.34	-0.5
4,096,577	-		Psest_3926	0.34	+1.3
4,096,930	+		Psest_3926	0.53	+1.0
4,096,930	+		Psest_3926	0.53	+2.0
4,096,930	+		Psest_3926	0.53	+0.8
4,096,930	+		Psest_3926	0.53	+1.7
4,096,930	+		Psest_3926	0.53	+2.2
4,096,930	+		Psest_3926	0.53	+3.9
4,096,930	+		Psest_3926	0.53	-0.5
4,096,930	+		Psest_3926	0.53	+1.6
4,096,930	+		Psest_3926	0.53	+1.7
4,096,930	+		Psest_3926	0.53	+1.0
4,096,930	+		Psest_3926	0.53	+2.0
4,096,930	+		Psest_3926	0.53	+2.3
4,096,931	-		Psest_3926	0.53	-0.4
4,096,931	-		Psest_3926	0.53	-1.5
4,096,931	-		Psest_3926	0.53	+1.3
4,096,931	-		Psest_3926	0.53	+3.3
4,096,931	-		Psest_3926	0.53	+2.0
4,096,931	-		Psest_3926	0.53	-0.8
4,096,931	-		Psest_3926	0.53	-0.6
4,096,931	-		Psest_3926	0.53	+3.0
4,096,931	-		Psest_3926	0.53	+0.9
4,096,931	-		Psest_3926	0.53	+2.6
4,096,931	-		Psest_3926	0.53	+2.6
4,096,931	-		Psest_3926	0.53	-0.1
4,096,931	-		Psest_3926	0.53	+1.8
4,096,931	-		Psest_3926	0.53	+1.3
4,096,931	-		Psest_3926	0.53	+1.7
4,096,931	-		Psest_3926	0.53	+1.9
4,096,931	-		Psest_3926	0.53	+0.3
4,096,931	-		Psest_3926	0.53	-0.8
4,096,931	-		Psest_3926	0.53	-0.3
4,097,137	+		Psest_3926	0.65	+0.4
4,097,137	+		Psest_3926	0.65	+0.4
4,097,138	-		Psest_3926	0.65	+2.6
4,097,138	-		Psest_3926	0.65	+1.5
4,097,138	-		Psest_3926	0.65	+0.0
4,097,138	-		Psest_3926	0.65	+1.3
4,097,138	-		Psest_3926	0.65	+0.5
4,097,493	+		Psest_3926	0.84	+1.2
4,097,494	-		Psest_3926	0.84	+2.4
4,097,575	+		Psest_3926	0.89	+1.5
4,097,576	-		Psest_3926	0.89	+2.1
4,097,576	-		Psest_3926	0.89	+2.4
4,097,576	-		Psest_3926	0.89	+1.8
4,097,763	+				+1.9
4,097,763	+				+3.3
4,097,763	+				+1.4
4,097,763	+				+2.5
4,097,763	+				+1.0
4,097,763	+				+1.7
4,097,763	+				+1.1
4,097,764	-				-0.6
4,097,793	+				+0.5
4,097,793	+				+0.6
4,097,793	+				+0.1
4,097,793	+				-1.4
4,097,793	+				-1.0
4,097,793	+				+0.1
4,097,794	-				-0.4
4,097,794	-				+0.6
4,097,794	-				+0.5
4,097,794	-				-0.5
4,097,794	-				-0.8
4,097,794	-				-0.8
4,097,794	-				-1.4
4,097,794	-				-1.7
4,097,797	+				+3.2
4,097,797	+				-0.7
4,097,797	+				+1.5
4,097,797	+				+0.3
4,097,797	+				+0.3
4,097,798	-				-0.2
4,097,798	-				-1.8
4,097,827	+				+2.1
4,097,827	+				+1.5
4,097,827	+				-0.7
4,097,860	+				-1.6
4,097,861	-				-1.2
4,097,861	-				-0.6
4,097,958	+				-1.2
4,097,966	+				-0.7
4,097,966	+				+1.9
4,097,966	+				+0.2
4,097,966	+				+1.5
4,097,966	+				+0.9
4,097,966	+				-0.4
4,097,966	+				+0.7
4,097,966	+				+0.0
4,097,966	+				-1.1
4,097,966	+				-0.3
4,097,966	+				+1.2
4,097,967	-				-1.1
4,097,967	-				-0.6
4,098,033	+				+1.1
4,098,034	-				+2.4
4,098,034	-				-0.3
4,098,042	+				+2.9
4,098,043	-				-0.1
4,098,043	-				+0.9
4,098,087	+				+2.0
4,098,088	-				+0.5
4,098,088	-				-2.0
4,098,088	-				+3.0
4,098,088	-				+0.3
4,098,088	-				-0.4
4,098,088	-				+1.2
4,098,088	-				-0.7
4,098,104	+		Psest_3927	0.11	+1.3
4,098,104	+		Psest_3927	0.11	+1.2
4,098,104	+		Psest_3927	0.11	+1.2
4,098,104	+		Psest_3927	0.11	+3.9
4,098,105	-		Psest_3927	0.11	+0.9
4,098,366	+		Psest_3927	0.29	+1.5
4,098,366	+		Psest_3927	0.29	+0.2
4,098,367	-		Psest_3927	0.29	-0.1
4,098,717	+		Psest_3927	0.53	+2.7
4,098,718	-		Psest_3927	0.53	+0.8