Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3860

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
4,030,643	-				+0.9
4,030,643	-				-1.8
4,030,643	-				+0.4
4,030,646	-				+0.9
4,030,646	-				+0.8
4,030,646	-				-0.0
4,030,646	-				-0.9
4,031,653	+		Psest_3860	0.19	-1.1
4,031,653	+		Psest_3860	0.19	+2.6
4,031,653	+		Psest_3860	0.19	-0.5
4,031,653	+		Psest_3860	0.19	-0.6
4,031,801	-		Psest_3860	0.37	+1.8
4,031,934	+		Psest_3860	0.54	-0.7
4,032,274	+				+0.1
4,032,274	+				+0.1
4,032,274	+				-0.9
4,032,275	-				-1.6
4,032,275	-				-0.7
4,032,275	-				-0.2
4,032,275	-				-1.2
4,032,310	+				+2.1
4,032,415	+				-0.6
4,032,415	+				-0.4
4,032,416	-				+0.8
4,032,439	+				+0.1
4,032,440	-				-0.6
4,032,440	-				+0.1
4,032,712	+		Psest_3861	0.35	+1.5
4,032,712	+		Psest_3861	0.35	-0.6
4,032,712	+		Psest_3861	0.35	+0.6
4,032,713	-		Psest_3861	0.35	-1.2
4,032,713	-		Psest_3861	0.35	-1.7
4,032,743	-		Psest_3861	0.39	-1.2
4,032,775	+		Psest_3861	0.43	-2.0
4,032,776	-		Psest_3861	0.43	-3.0
4,032,776	-		Psest_3861	0.43	-0.2
4,032,776	-		Psest_3861	0.43	-2.1
4,032,776	-		Psest_3861	0.43	-2.8
4,033,069	-		Psest_3861	0.82	-2.0
4,033,278	+				-0.7
4,033,278	+				-2.4
4,033,279	-				-0.1