Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3780

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,948,696	-				-0.5
3,948,754	+				+0.3
3,948,755	-				-0.4
3,948,755	-				-1.9
3,948,883	+		Psest_3779	0.21	-1.9
3,948,883	+		Psest_3779	0.21	+1.7
3,948,884	-		Psest_3779	0.22	-2.1
3,948,884	-		Psest_3779	0.22	+0.8
3,948,907	+		Psest_3779	0.25	-0.4
3,948,907	+		Psest_3779	0.25	-0.3
3,948,907	+		Psest_3779	0.25	+0.4
3,948,926	-		Psest_3779	0.28	-1.9
3,948,926	-		Psest_3779	0.28	-1.9
3,948,985	+		Psest_3779	0.38	+0.6
3,948,985	+		Psest_3779	0.38	-2.6
3,948,985	+		Psest_3779	0.38	-0.9
3,948,985	+		Psest_3779	0.38	-1.6
3,948,986	-		Psest_3779	0.38	+0.6
3,948,986	-		Psest_3779	0.38	-1.4
3,949,007	-		Psest_3779	0.41	+0.7
3,949,007	-		Psest_3779	0.41	+0.5
3,949,144	+		Psest_3779	0.64	-0.4
3,949,144	+		Psest_3779	0.64	-1.5
3,949,144	+		Psest_3779	0.64	+1.6
3,949,145	-		Psest_3779	0.64	+0.8
3,949,145	-		Psest_3779	0.64	+1.5
3,949,243	+		Psest_3779	0.80	+1.8
3,949,251	-		Psest_3779	0.81	-0.7
3,949,357	+				-1.4
3,949,357	+				-1.2
3,949,357	+				+0.3
3,949,357	+				+0.6
3,949,357	+				-0.8
3,949,358	-				-0.1
3,949,358	-				-2.7
3,949,358	-				+0.5
3,949,665	-		Psest_3780	0.37	-1.1
3,949,665	-		Psest_3780	0.37	+0.6
3,949,720	-		Psest_3780	0.44	-1.2
3,949,720	-		Psest_3780	0.44	+0.9
3,949,720	-		Psest_3780	0.44	+1.6
3,949,720	-		Psest_3780	0.44	+1.2
3,949,812	+		Psest_3780	0.56	+0.7
3,949,813	-		Psest_3780	0.56	-0.8
3,949,813	-		Psest_3780	0.56	+1.7
3,949,813	-		Psest_3780	0.56	+0.4
3,950,250	+				+1.0
3,950,251	-				+1.1
3,950,251	-				-1.3
3,950,251	-				-2.7
3,950,521	-		Psest_3781	0.18	-1.0
3,950,521	-		Psest_3781	0.18	+0.8
3,950,608	-		Psest_3781	0.24	-1.6
3,950,655	+		Psest_3781	0.27	-0.6
3,950,655	+		Psest_3781	0.27	-1.8
3,950,655	+		Psest_3781	0.27	-0.6
3,950,655	+		Psest_3781	0.27	+1.3
3,950,655	+		Psest_3781	0.27	+3.6
3,950,655	+		Psest_3781	0.27	-2.1
3,950,655	+		Psest_3781	0.27	-0.6
3,950,655	+		Psest_3781	0.27	-0.0
3,950,655	+		Psest_3781	0.27	-1.2
3,950,655	+		Psest_3781	0.27	-0.3
3,950,655	+		Psest_3781	0.27	+0.6
3,950,655	+		Psest_3781	0.27	-2.7
3,950,655	+		Psest_3781	0.27	-0.4
3,950,655	+		Psest_3781	0.27	-0.8
3,950,656	-		Psest_3781	0.27	+1.1
3,950,656	-		Psest_3781	0.27	-1.1
3,950,656	-		Psest_3781	0.27	-1.7
3,950,656	-		Psest_3781	0.27	+0.8
3,950,656	-		Psest_3781	0.27	-1.6
3,950,656	-		Psest_3781	0.27	+1.0
3,950,656	-		Psest_3781	0.27	+0.3
3,950,656	-		Psest_3781	0.27	+0.3
3,950,656	-		Psest_3781	0.27	+0.1
3,950,656	-		Psest_3781	0.27	+0.2
3,950,656	-		Psest_3781	0.27	-0.3
3,950,739	+		Psest_3781	0.33	+1.6
3,950,931	+		Psest_3781	0.45	+0.8
3,950,931	+		Psest_3781	0.45	-0.1
3,951,051	+		Psest_3781	0.53	-1.3
3,951,051	+		Psest_3781	0.53	-0.7
3,951,051	+		Psest_3781	0.53	-0.3
3,951,051	+		Psest_3781	0.53	+0.7
3,951,051	+		Psest_3781	0.53	+1.0
3,951,051	+		Psest_3781	0.53	+0.8
3,951,051	+		Psest_3781	0.53	+0.8
3,951,051	+		Psest_3781	0.53	-0.4
3,951,051	+		Psest_3781	0.53	+1.8
3,951,051	+		Psest_3781	0.53	-2.3
3,951,051	+		Psest_3781	0.53	-1.2
3,951,051	+		Psest_3781	0.53	-2.4
3,951,051	+		Psest_3781	0.53	+0.3
3,951,051	+		Psest_3781	0.53	-0.3
3,951,051	+		Psest_3781	0.53	-0.8
3,951,052	-		Psest_3781	0.53	-2.9
3,951,052	-		Psest_3781	0.53	-1.1
3,951,052	-		Psest_3781	0.53	+1.4
3,951,052	-		Psest_3781	0.53	-0.5
3,951,052	-		Psest_3781	0.53	-0.4
3,951,052	-		Psest_3781	0.53	-0.4
3,951,052	-		Psest_3781	0.53	-0.3
3,951,052	-		Psest_3781	0.53	-0.4
3,951,052	-		Psest_3781	0.53	+0.8
3,951,052	-		Psest_3781	0.53	+0.3
3,951,052	-		Psest_3781	0.53	-1.6
3,951,057	+		Psest_3781	0.54	+0.2
3,951,057	+		Psest_3781	0.54	-0.1
3,951,057	+		Psest_3781	0.54	-1.2
3,951,057	+		Psest_3781	0.54	+0.4
3,951,057	+		Psest_3781	0.54	-2.8
3,951,057	+		Psest_3781	0.54	-0.4
3,951,057	+		Psest_3781	0.54	-1.3
3,951,058	-		Psest_3781	0.54	-0.3
3,951,058	-		Psest_3781	0.54	+0.6
3,951,058	-		Psest_3781	0.54	-0.5
3,951,058	-		Psest_3781	0.54	+0.5
3,951,058	-		Psest_3781	0.54	-1.9
3,951,058	-		Psest_3781	0.54	+0.2
3,951,058	-		Psest_3781	0.54	+1.1
3,951,058	-		Psest_3781	0.54	-0.4
3,951,058	-		Psest_3781	0.54	+0.1