Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3235 and Psest_3236 are separated by 130 nucleotides Psest_3236 and Psest_3237 are separated by 169 nucleotides Psest_3237 and Psest_3238 are separated by 89 nucleotides
Psest_3235: Psest_3235 - Protein of unknown function (DUF1329)., at 3,405,608 to 3,406,969
_3235
Psest_3236: Psest_3236 - hypothetical protein, at 3,407,100 to 3,407,684
_3236
Psest_3237: Psest_3237 - hypothetical protein, at 3,407,854 to 3,408,045
_3237
Psest_3238: Psest_3238 - malate:quinone-oxidoreductase, at 3,408,135 to 3,409,625
_3238
Position (kb)
3407
3408
3409 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3406.899 kb on - strand at 3406.899 kb on - strand at 3406.904 kb on + strand at 3406.904 kb on + strand at 3406.904 kb on + strand at 3406.904 kb on + strand at 3406.904 kb on + strand at 3406.905 kb on - strand at 3406.905 kb on - strand at 3406.905 kb on - strand at 3406.905 kb on - strand at 3406.905 kb on - strand at 3406.905 kb on - strand at 3406.905 kb on - strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.910 kb on + strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.911 kb on - strand at 3406.931 kb on + strand at 3406.931 kb on + strand at 3407.139 kb on + strand at 3407.311 kb on + strand, within Psest_3236 at 3407.312 kb on - strand, within Psest_3236 at 3407.335 kb on + strand, within Psest_3236 at 3407.335 kb on + strand, within Psest_3236 at 3407.335 kb on + strand, within Psest_3236 at 3407.335 kb on + strand, within Psest_3236 at 3407.335 kb on + strand, within Psest_3236 at 3407.335 kb on + strand, within Psest_3236 at 3407.336 kb on - strand, within Psest_3236 at 3407.377 kb on + strand, within Psest_3236 at 3407.724 kb on + strand at 3407.725 kb on - strand at 3407.725 kb on - strand at 3407.917 kb on + strand, within Psest_3237 at 3408.139 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 3,406,899 - -0.6 3,406,899 - -2.2 3,406,904 + -0.0 3,406,904 + -0.7 3,406,904 + +0.0 3,406,904 + +2.1 3,406,904 + +0.5 3,406,905 - -0.4 3,406,905 - +0.3 3,406,905 - +0.9 3,406,905 - -0.5 3,406,905 - -1.8 3,406,905 - +0.1 3,406,905 - +1.2 3,406,910 + -0.2 3,406,910 + +0.0 3,406,910 + +1.3 3,406,910 + -0.9 3,406,910 + +1.7 3,406,910 + -0.4 3,406,910 + +1.7 3,406,910 + +0.5 3,406,910 + +0.9 3,406,910 + -1.0 3,406,911 - +2.1 3,406,911 - +0.6 3,406,911 - +0.4 3,406,911 - +0.7 3,406,911 - +2.1 3,406,911 - -1.8 3,406,911 - +0.5 3,406,911 - +0.1 3,406,911 - +0.4 3,406,911 - -0.4 3,406,911 - +1.4 3,406,911 - +0.7 3,406,931 + -1.2 3,406,931 + -1.6 3,407,139 + -0.4 3,407,311 + Psest_3236 0.36 +1.7 3,407,312 - Psest_3236 0.36 +0.3 3,407,335 + Psest_3236 0.40 +0.9 3,407,335 + Psest_3236 0.40 +0.7 3,407,335 + Psest_3236 0.40 +0.5 3,407,335 + Psest_3236 0.40 -0.8 3,407,335 + Psest_3236 0.40 -0.2 3,407,335 + Psest_3236 0.40 -0.6 3,407,336 - Psest_3236 0.40 -0.9 3,407,377 + Psest_3236 0.47 +1.7 3,407,724 + -0.3 3,407,725 - -2.5 3,407,725 - +1.3 3,407,917 + Psest_3237 0.33 +0.8 3,408,139 + -0.7
Or see this region's nucleotide sequence