Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3218

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,390,773	+		Psest_3217	0.83	-0.8
3,390,773	+		Psest_3217	0.83	-0.2
3,390,773	+		Psest_3217	0.83	-0.2
3,390,774	-		Psest_3217	0.83	-0.5
3,390,774	-		Psest_3217	0.83	-0.8
3,390,774	-		Psest_3217	0.83	+0.4
3,390,959	+		Psest_3217	0.88	+0.1
3,390,959	+		Psest_3217	0.88	+0.4
3,390,960	-		Psest_3217	0.88	+0.5
3,390,960	-		Psest_3217	0.88	-0.8
3,390,974	+		Psest_3217	0.88	-0.1
3,390,974	+		Psest_3217	0.88	-0.0
3,390,974	+		Psest_3217	0.88	-0.0
3,390,974	+		Psest_3217	0.88	-0.6
3,390,974	+		Psest_3217	0.88	+0.0
3,390,974	+		Psest_3217	0.88	-0.1
3,390,974	+		Psest_3217	0.88	-1.1
3,390,974	+		Psest_3217	0.88	-0.9
3,390,974	+		Psest_3217	0.88	+0.1
3,390,974	+		Psest_3217	0.88	-0.3
3,390,974	+		Psest_3217	0.88	-0.0
3,390,974	+		Psest_3217	0.88	-1.0
3,390,975	-		Psest_3217	0.88	+1.7
3,390,975	-		Psest_3217	0.88	-2.1
3,390,975	-		Psest_3217	0.88	-2.0
3,390,975	-		Psest_3217	0.88	+0.4
3,390,975	-		Psest_3217	0.88	-3.1
3,390,975	-		Psest_3217	0.88	-0.1
3,390,975	-		Psest_3217	0.88	+1.0
3,390,975	-		Psest_3217	0.88	-0.0
3,390,975	-		Psest_3217	0.88	-0.6
3,390,975	-		Psest_3217	0.88	-0.2
3,390,998	+		Psest_3217	0.89	+0.0
3,390,998	+		Psest_3217	0.89	+0.3
3,390,998	+		Psest_3217	0.89	+1.0
3,390,998	+		Psest_3217	0.89	-0.0
3,390,998	+		Psest_3217	0.89	+0.2
3,390,999	-		Psest_3217	0.89	-1.3
3,390,999	-		Psest_3217	0.89	-0.8
3,390,999	-		Psest_3217	0.89	+0.0
3,390,999	-		Psest_3217	0.89	+1.4
3,390,999	-		Psest_3217	0.89	-0.6
3,390,999	-		Psest_3217	0.89	-0.4
3,391,103	+				+0.4
3,391,104	-				-0.7
3,391,104	-				-0.1
3,391,209	-				-1.1
3,391,260	+				-0.0
3,391,260	+				+0.7
3,391,260	+				-0.8
3,391,260	+				+0.8
3,391,261	-				-0.6
3,391,261	-				-0.0
3,391,261	-				-2.0
3,391,261	-				+0.1
3,391,261	-				+0.3
3,391,360	+				+0.0
3,391,360	+				-1.2
3,391,459	-				+0.5
3,391,542	+				-2.5
3,391,547	+				-0.7
3,391,547	+				-1.9
3,391,548	-				-0.9
3,391,550	+				-2.1
3,391,550	+				-0.3
3,391,557	+				+0.1
3,391,558	-				-0.1
3,391,650	+		Psest_3218	0.14	-2.1
3,391,692	+		Psest_3218	0.21	-0.3
3,391,753	+		Psest_3218	0.30	-1.5
3,391,763	-		Psest_3218	0.32	-0.9
3,391,873	+		Psest_3218	0.48	+1.4
3,391,873	+		Psest_3218	0.48	+0.9
3,391,874	-		Psest_3218	0.49	+0.1
3,391,874	-		Psest_3218	0.49	-1.1
3,391,874	-		Psest_3218	0.49	-1.6
3,391,874	-		Psest_3218	0.49	-1.1
3,391,977	+		Psest_3218	0.64	-0.1
3,391,977	+		Psest_3218	0.64	-0.5
3,391,977	+		Psest_3218	0.64	-0.7
3,391,977	+		Psest_3218	0.64	-1.1
3,391,977	+		Psest_3218	0.64	-2.3
3,391,978	-		Psest_3218	0.65	+2.7
3,391,978	-		Psest_3218	0.65	-1.3
3,391,978	-		Psest_3218	0.65	-2.6
3,391,978	-		Psest_3218	0.65	-2.6
3,391,978	-		Psest_3218	0.65	+0.1
3,391,978	-		Psest_3218	0.65	+0.5
3,391,978	-		Psest_3218	0.65	-0.2
3,391,980	+		Psest_3218	0.65	+0.0
3,392,104	-		Psest_3218	0.84	+0.5
3,392,104	-		Psest_3218	0.84	+0.9
3,392,104	-		Psest_3218	0.84	-1.0
3,392,105	+		Psest_3218	0.84	-2.2
3,392,105	+		Psest_3218	0.84	-1.3
3,392,105	+		Psest_3218	0.84	-0.4
3,392,105	+		Psest_3218	0.84	-0.2
3,392,105	+		Psest_3218	0.84	+0.4
3,392,105	+		Psest_3218	0.84	-0.9
3,392,106	-		Psest_3218	0.84	-0.9
3,392,106	-		Psest_3218	0.84	+1.1
3,392,106	-		Psest_3218	0.84	-2.5
3,392,106	-		Psest_3218	0.84	+0.1
3,392,106	-		Psest_3218	0.84	-2.2
3,392,106	-		Psest_3218	0.84	-2.3
3,392,106	-		Psest_3218	0.84	+0.4
3,392,106	-		Psest_3218	0.84	-1.7
3,392,106	-		Psest_3218	0.84	-0.6
3,392,106	-		Psest_3218	0.84	-1.4
3,392,106	-		Psest_3218	0.84	-1.1
3,392,106	-		Psest_3218	0.84	+0.3
3,392,106	-		Psest_3218	0.84	+0.3
3,392,106	-		Psest_3218	0.84	+4.1
3,392,106	-		Psest_3218	0.84	-1.6
3,392,106	-		Psest_3218	0.84	-0.4
3,392,106	-		Psest_3218	0.84	+0.1
3,392,106	-		Psest_3218	0.84	-0.0
3,392,139	+		Psest_3218	0.89	-1.0
3,392,140	-		Psest_3218	0.89	+0.4
3,392,140	-		Psest_3218	0.89	-1.4
3,392,153	-				-1.1
3,392,209	+				+0.5
3,392,210	-				-1.9
3,392,213	+				-1.0
3,392,213	+				+0.1
3,392,213	+				-0.9
3,392,213	+				-2.1
3,392,214	-				-0.8
3,392,214	-				+0.5
3,392,214	-				-0.8
3,392,214	-				-2.2
3,392,214	-				+0.4
3,392,214	-				-0.4
3,392,214	-				-2.0
3,392,214	-				-1.0
3,392,214	-				-3.0
3,392,214	-				+0.9
3,392,214	-				-0.7
3,392,214	-				+0.7
3,392,233	+				-0.6
3,392,254	-				+0.3
3,392,279	-				-0.5
3,392,279	-				-2.1
3,392,279	-				-1.2
3,392,283	+				-0.9
3,392,283	+				-0.2
3,392,283	+				+1.3
3,392,283	+				-0.4
3,392,284	-				-0.3
3,392,305	+				+0.1
3,392,305	+				-1.8
3,392,306	-				+0.5
3,392,306	-				-0.5
3,392,438	+		Psest_3219	0.15	+2.4
3,392,438	+		Psest_3219	0.15	+1.1
3,392,438	+		Psest_3219	0.15	-0.9
3,392,439	-		Psest_3219	0.15	-1.2
3,392,439	-		Psest_3219	0.15	+0.7
3,392,440	+		Psest_3219	0.15	-0.7
3,392,440	+		Psest_3219	0.15	+0.9
3,392,441	-		Psest_3219	0.16	-0.8
3,392,441	-		Psest_3219	0.16	-0.7
3,392,441	-		Psest_3219	0.16	+2.2
3,392,582	+		Psest_3219	0.37	+1.1
3,392,582	+		Psest_3219	0.37	+0.7
3,392,583	-		Psest_3219	0.37	+2.7
3,392,583	-		Psest_3219	0.37	+0.3
3,392,583	-		Psest_3219	0.37	+0.1
3,392,583	-		Psest_3219	0.37	-0.9
3,392,671	+		Psest_3219	0.51	+1.2
3,392,672	-		Psest_3219	0.51	-1.1
3,392,672	-		Psest_3219	0.51	-1.8
3,392,672	-		Psest_3219	0.51	+1.4
3,393,012	+				+1.0