Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3189

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,360,054	-				+0.3
3,360,158	+		Psest_3187	0.21	-0.9
3,360,158	+		Psest_3187	0.21	-0.5
3,360,159	-		Psest_3187	0.21	+1.9
3,360,159	-		Psest_3187	0.21	-2.0
3,360,159	-		Psest_3187	0.21	+0.2
3,360,159	-		Psest_3187	0.21	+1.5
3,360,159	-		Psest_3187	0.21	-1.2
3,360,159	-		Psest_3187	0.21	+0.7
3,360,228	-		Psest_3187	0.36	+0.4
3,360,240	+		Psest_3187	0.39	-0.8
3,360,430	+		Psest_3187	0.80	+0.9
3,360,430	+		Psest_3187	0.80	+1.9
3,360,430	+		Psest_3187	0.80	-2.4
3,360,430	+		Psest_3187	0.80	+0.1
3,360,430	+		Psest_3187	0.80	-0.2
3,360,431	-		Psest_3187	0.81	+0.1
3,360,431	-		Psest_3187	0.81	+0.3
3,360,431	-		Psest_3187	0.81	+1.0
3,360,440	+		Psest_3187	0.83	+0.4
3,360,440	+		Psest_3187	0.83	+0.3
3,360,441	-		Psest_3187	0.83	-0.2
3,360,586	+		Psest_3188	0.12	+1.0
3,360,587	-		Psest_3188	0.12	+1.0
3,360,587	-		Psest_3188	0.12	+2.2
3,360,603	-		Psest_3188	0.16	+0.2
3,360,606	-		Psest_3188	0.17	-0.1
3,360,606	-		Psest_3188	0.17	+0.4
3,360,900	-		Psest_3188	0.86	-1.0
3,360,900	-		Psest_3188	0.86	-2.8
3,360,900	-		Psest_3188	0.86	+1.3
3,361,027	-		Psest_3189	0.12	+2.7
3,361,263	+		Psest_3189	0.74	-0.1
3,361,264	-		Psest_3189	0.74	-0.2
3,361,264	-		Psest_3189	0.74	+2.3
3,361,264	-		Psest_3189	0.74	-0.8
3,361,264	-		Psest_3189	0.74	+1.5
3,361,438	-				-1.6
3,361,458	+				+0.2
3,361,459	-				-1.5
3,361,459	-				+2.4
3,361,473	+				+3.0
3,361,473	+				+1.4
3,361,473	+				-0.8
3,361,473	+				-0.2
3,361,473	+				-0.2
3,361,473	+				-0.6
3,361,473	+				+2.2
3,361,474	-				+0.4
3,361,474	-				+1.0
3,361,476	+				+4.2
3,361,476	+				+0.6
3,361,477	-				+3.0
3,361,477	-				+1.0
3,361,505	+				+2.4
3,361,506	-				-0.1
3,361,674	+		Psest_3190	0.11	+2.0
3,361,674	+		Psest_3190	0.11	+0.4
3,361,675	-		Psest_3190	0.11	-1.0
3,362,078	+		Psest_3190	0.39	+0.6
3,362,079	-		Psest_3190	0.39	+0.3