Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0031

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
30,550	+				-0.2
30,550	+				+0.4
30,551	-				-0.8
30,551	-				+0.7
30,554	+				-0.0
30,625	-		Psest_0030	0.12	+0.0
30,869	+		Psest_0030	0.52	-2.0
30,870	-		Psest_0030	0.52	-2.8
30,974	-		Psest_0030	0.69	+1.5
31,125	-				+0.8
31,125	-				-0.4
31,310	+		Psest_0031	0.43	+1.9
31,311	-		Psest_0031	0.43	+1.2
31,570	+				-0.8
31,570	+				-2.0
31,570	+				+0.6
31,570	+				-0.2
31,571	-				+1.0
31,571	-				-2.1
31,571	-				-1.5
31,663	-				+0.2
31,665	-				-0.5
31,665	-				-0.1
31,680	-				-2.0
31,680	-				-2.2
31,729	-				-0.5
31,747	-				+0.8
31,863	+		Psest_0032	0.14	-1.4
31,864	-		Psest_0032	0.14	-1.8
31,879	+		Psest_0032	0.16	+0.0
31,879	+		Psest_0032	0.16	+0.3
31,879	+		Psest_0032	0.16	+0.2
31,880	-		Psest_0032	0.16	+0.7
31,880	-		Psest_0032	0.16	-3.4
31,880	-		Psest_0032	0.16	+0.0
32,194	+		Psest_0032	0.49	-0.7
32,194	+		Psest_0032	0.49	-0.5
32,194	+		Psest_0032	0.49	-1.4
32,194	+		Psest_0032	0.49	-0.6
32,194	+		Psest_0032	0.49	+1.6
32,194	+		Psest_0032	0.49	-1.6
32,195	-		Psest_0032	0.49	+0.4
32,195	-		Psest_0032	0.49	+0.9
32,195	-		Psest_0032	0.49	-1.9
32,195	-		Psest_0032	0.49	+0.3
32,195	-		Psest_0032	0.49	+1.6
32,197	+		Psest_0032	0.50	+0.2
32,197	+		Psest_0032	0.50	-0.3
32,197	+		Psest_0032	0.50	+0.5
32,197	+		Psest_0032	0.50	-0.5
32,197	+		Psest_0032	0.50	+0.7
32,197	+		Psest_0032	0.50	+0.0
32,197	+		Psest_0032	0.50	-0.7
32,197	+		Psest_0032	0.50	-2.2
32,197	+		Psest_0032	0.50	+1.8
32,198	-		Psest_0032	0.50	-0.8
32,198	-		Psest_0032	0.50	+0.1
32,198	-		Psest_0032	0.50	-0.6
32,198	-		Psest_0032	0.50	+0.2
32,198	-		Psest_0032	0.50	-2.2
32,198	-		Psest_0032	0.50	-0.2
32,198	-		Psest_0032	0.50	+1.1
32,279	-		Psest_0032	0.58	-1.8
32,301	+		Psest_0032	0.61	+1.2
32,341	+		Psest_0032	0.65	+1.2
32,341	+		Psest_0032	0.65	-0.8
32,341	+		Psest_0032	0.65	-1.3
32,341	+		Psest_0032	0.65	+2.9
32,341	+		Psest_0032	0.65	+2.1
32,341	+		Psest_0032	0.65	+0.6
32,342	-		Psest_0032	0.65	+0.4
32,342	-		Psest_0032	0.65	-0.1
32,342	-		Psest_0032	0.65	-1.5
32,342	-		Psest_0032	0.65	-1.4
32,342	-		Psest_0032	0.65	-0.3
32,342	-		Psest_0032	0.65	-2.3
32,342	-		Psest_0032	0.65	+0.6
32,342	-		Psest_0032	0.65	-0.3
32,342	-				+1.2
32,342	-		Psest_0032	0.65	+0.4
32,342	-		Psest_0032	0.65	-0.4
32,454	+		Psest_0032	0.77	-0.3
32,454	+		Psest_0032	0.77	-0.1
32,455	-		Psest_0032	0.77	+0.5
32,455	-		Psest_0032	0.77	-0.2