Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3038

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,220,309	+		Psest_3036	0.48	-0.2
3,220,309	+		Psest_3036	0.48	+0.8
3,220,310	-		Psest_3036	0.48	-0.5
3,220,310	-		Psest_3036	0.48	+0.5
3,220,310	-		Psest_3036	0.48	+0.3
3,220,310	-		Psest_3036	0.48	-1.9
3,220,310	-		Psest_3036	0.48	-1.3
3,220,310	-		Psest_3036	0.48	+1.1
3,220,310	-		Psest_3036	0.48	+0.6
3,220,310	-		Psest_3036	0.48	+0.6
3,220,310	-		Psest_3036	0.48	-0.5
3,220,310	-		Psest_3036	0.48	+2.1
3,220,399	+		Psest_3036	0.61	+1.2
3,220,409	-		Psest_3036	0.62	-0.4
3,220,515	+		Psest_3036	0.77	+0.3
3,220,516	-		Psest_3036	0.77	-2.2
3,220,516	-		Psest_3036	0.77	+1.1
3,220,516	-		Psest_3036	0.77	+1.3
3,220,561	+		Psest_3036	0.84	-1.3
3,220,561	+		Psest_3036	0.84	+2.6
3,220,562	-		Psest_3036	0.84	-0.1
3,220,591	+		Psest_3036	0.88	+0.2
3,220,592	-		Psest_3036	0.88	-0.8
3,220,592	-		Psest_3036	0.88	+0.7
3,220,592	-		Psest_3036	0.88	+0.8
3,220,592	-		Psest_3036	0.88	-1.1
3,220,710	-				-0.3
3,221,018	-		Psest_3037	0.57	+1.9
3,221,056	+		Psest_3037	0.65	-0.4
3,221,056	+		Psest_3037	0.65	+0.4
3,221,060	+		Psest_3037	0.65	-1.9
3,221,060	+		Psest_3037	0.65	+0.7
3,221,060	+		Psest_3037	0.65	+1.2
3,221,060	+		Psest_3037	0.65	-0.6
3,221,060	+		Psest_3037	0.65	-0.1
3,221,060	+		Psest_3037	0.65	-0.2
3,221,060	+		Psest_3037	0.65	+1.4
3,221,060	+		Psest_3037	0.65	+0.8
3,221,060	+		Psest_3037	0.65	-0.2
3,221,061	-		Psest_3037	0.66	+1.0
3,221,061	-		Psest_3037	0.66	-0.6
3,221,061	-		Psest_3037	0.66	+0.9
3,221,061	-		Psest_3037	0.66	-1.4
3,221,090	+		Psest_3037	0.72	-0.7
3,221,090	+		Psest_3037	0.72	-1.0
3,221,090	+		Psest_3037	0.72	-2.4
3,221,090	+		Psest_3037	0.72	-0.9
3,221,091	-		Psest_3037	0.72	-1.8
3,221,096	+		Psest_3037	0.73	+0.0
3,221,097	-		Psest_3037	0.73	-1.0
3,221,171	+		Psest_3037	0.88	-0.7
3,221,171	+		Psest_3037	0.88	+0.9
3,221,175	-		Psest_3037	0.89	-0.7
3,221,335	+				-1.6
3,221,335	+				-0.6
3,221,335	+				-0.3
3,221,336	-				+1.9
3,221,371	+		Psest_3038	0.11	-0.8
3,221,371	+		Psest_3038	0.11	+1.1
3,221,371	+		Psest_3038	0.11	+0.3
3,221,372	-		Psest_3038	0.11	+0.5
3,221,374	+		Psest_3038	0.11	-3.2
3,221,374	+		Psest_3038	0.11	+0.6
3,221,375	-		Psest_3038	0.11	-0.7
3,221,386	+		Psest_3038	0.12	-1.0
3,221,386	+		Psest_3038	0.12	-0.9
3,221,386	+		Psest_3038	0.12	-1.4
3,221,386	+		Psest_3038	0.12	-0.6
3,221,386	+		Psest_3038	0.12	-0.2
3,221,387	-		Psest_3038	0.12	+1.8
3,221,387	-		Psest_3038	0.12	-1.0
3,221,387	-		Psest_3038	0.12	-0.9
3,221,387	-		Psest_3038	0.12	+1.3
3,221,387	-		Psest_3038	0.12	-1.5
3,221,387	-		Psest_3038	0.12	+0.2
3,221,563	-		Psest_3038	0.27	-0.7
3,221,563	-		Psest_3038	0.27	+0.5
3,221,563	-		Psest_3038	0.27	+1.4
3,221,589	+		Psest_3038	0.29	-0.8
3,221,633	-		Psest_3038	0.33	+0.1
3,221,704	+		Psest_3038	0.39	-1.4
3,221,704	+		Psest_3038	0.39	-0.3
3,221,704	+		Psest_3038	0.39	-0.0
3,221,704	+		Psest_3038	0.39	-0.7
3,221,704	+		Psest_3038	0.39	-0.5
3,221,704	+		Psest_3038	0.39	+1.0
3,221,705	-		Psest_3038	0.39	-2.4
3,221,705	-		Psest_3038	0.39	+1.6
3,221,705	-		Psest_3038	0.39	+0.3
3,221,705	-		Psest_3038	0.39	+2.1
3,221,705	-		Psest_3038	0.39	-0.8
3,221,807	+		Psest_3038	0.47	+0.3
3,221,807	+		Psest_3038	0.47	-1.9
3,221,808	-		Psest_3038	0.48	-0.9
3,221,988	-		Psest_3038	0.63	-0.2
3,221,989	+		Psest_3038	0.63	-2.3
3,221,989	+		Psest_3038	0.63	+1.2
3,221,989	+		Psest_3038	0.63	-0.3
3,221,989	+		Psest_3038	0.63	+0.6
3,221,989	+		Psest_3038	0.63	-1.2
3,221,989	+		Psest_3038	0.63	-1.2
3,221,989	+		Psest_3038	0.63	-0.7
3,221,989	+		Psest_3038	0.63	-0.5
3,221,990	-		Psest_3038	0.63	+0.2
3,221,990	-		Psest_3038	0.63	+0.9
3,221,990	-		Psest_3038	0.63	+1.4
3,221,990	-		Psest_3038	0.63	+0.3
3,221,990	-		Psest_3038	0.63	-0.6
3,221,990	-		Psest_3038	0.63	+1.3
3,221,990	-		Psest_3038	0.63	+0.7
3,221,990	-		Psest_3038	0.63	-1.4
3,221,990	-		Psest_3038	0.63	-0.4
3,221,990	-		Psest_3038	0.63	-1.5
3,221,990	-		Psest_3038	0.63	-0.2
3,221,990	-		Psest_3038	0.63	+1.1
3,221,990	-		Psest_3038	0.63	-0.8
3,221,990	-		Psest_3038	0.63	-0.7
3,222,040	+		Psest_3038	0.67	-0.8
3,222,040	+		Psest_3038	0.67	-2.0
3,222,040	+		Psest_3038	0.67	-0.2
3,222,041	-		Psest_3038	0.67	-0.1
3,222,041	-		Psest_3038	0.67	-0.4
3,222,041	-		Psest_3038	0.67	-0.6
3,222,041	-		Psest_3038	0.67	-2.6
3,222,041	-		Psest_3038	0.67	+0.4
3,222,041	-		Psest_3038	0.67	-0.8
3,222,216	-		Psest_3038	0.82	+0.2
3,222,326	-				-1.5
3,222,326	-				-0.9
3,222,326	-				-0.8
3,222,326	-				-1.7
3,222,383	-				+0.9
3,222,534	+				+0.5
3,222,592	+				-0.4
3,222,659	+		Psest_3039	0.19	-1.0
3,222,659	+		Psest_3039	0.19	+0.5
3,222,660	-		Psest_3039	0.20	-0.6
3,222,837	-				-0.2
3,222,847	+				-0.3
3,222,848	-				+1.7
3,222,917	+		Psest_3040	0.25	-2.4
3,222,935	+		Psest_3040	0.32	+0.3
3,222,935	+		Psest_3040	0.32	-2.3
3,222,935	+		Psest_3040	0.32	+1.1
3,222,935	+		Psest_3040	0.32	-1.6
3,222,935	+		Psest_3040	0.32	+2.0
3,222,935	+		Psest_3040	0.32	-1.3
3,222,936	-		Psest_3040	0.33	-1.5
3,223,060	-		Psest_3040	0.81	+1.2
3,223,060	-		Psest_3040	0.81	-0.9
3,223,060	-		Psest_3040	0.81	-1.5
3,223,060	-		Psest_3040	0.81	+1.7
3,223,075	+		Psest_3040	0.87	-0.2
3,223,076	-		Psest_3040	0.87	-1.1
3,223,076	-		Psest_3040	0.87	-1.3
3,223,153	+				-1.2
3,223,154	-				+0.5
3,223,154	-				+0.9
3,223,365	+		Psest_3041	0.10	-1.5
3,223,366	-		Psest_3041	0.10	+0.1
3,223,366	-		Psest_3041	0.10	+1.5
3,223,366	-		Psest_3041	0.10	+0.3
3,223,366	-		Psest_3041	0.10	+0.2
3,223,386	+		Psest_3041	0.11	+0.4
3,223,387	-		Psest_3041	0.11	+1.2
3,223,387	-		Psest_3041	0.11	-0.1
3,223,417	+		Psest_3041	0.12	-0.4
3,223,417	+		Psest_3041	0.12	-0.2
3,223,417	+		Psest_3041	0.12	+0.4