Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3013

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,200,204	+				-0.2
3,200,205	-				-1.9
3,200,552	+		Psest_3012	0.45	-0.1
3,200,552	+		Psest_3012	0.45	+0.2
3,200,552	+		Psest_3012	0.45	-1.4
3,200,552	+		Psest_3012	0.45	-1.7
3,200,552	+		Psest_3012	0.45	+0.5
3,200,552	+		Psest_3012	0.45	+2.3
3,200,552	+		Psest_3012	0.45	-0.6
3,200,552	+		Psest_3012	0.45	-1.6
3,200,553	-		Psest_3012	0.45	+0.1
3,200,553	-		Psest_3012	0.45	+0.6
3,200,553	-		Psest_3012	0.45	-0.1
3,200,553	-		Psest_3012	0.45	-0.6
3,200,553	-		Psest_3012	0.45	+0.6
3,200,950	-				-1.1
3,200,950	-				-1.1
3,200,961	+				-0.7
3,200,961	+				+0.8
3,200,961	+				-2.1
3,200,961	+				+0.4
3,200,961	+				+0.3
3,200,961	+				-0.4
3,200,961	+				+0.2
3,200,961	+				-0.3
3,200,961	+				-0.8
3,200,961	+				-0.6
3,200,961	+				+2.0
3,200,961	+				-0.9
3,200,961	+				+0.1
3,200,961	+				+0.7
3,200,961	+				+1.8
3,200,962	-				-0.4
3,200,962	-				-0.6
3,200,962	-				-2.5
3,200,962	-				+0.2
3,200,962	-				-1.6
3,200,962	-				+1.0
3,200,962	-				+0.2
3,200,962	-				-1.5
3,200,962	-				+0.0
3,200,962	-				-0.3
3,200,962	-				+0.2
3,201,012	+				-2.7
3,201,013	-				-0.9
3,201,013	-				-0.6
3,201,013	-				+2.3
3,201,013	-				+2.6
3,201,219	+		Psest_3013	0.24	-1.3
3,201,345	+		Psest_3013	0.34	-0.3
3,201,346	-		Psest_3013	0.34	+1.2
3,201,442	-		Psest_3013	0.42	+0.2
3,202,012	-		Psest_3013	0.86	+2.0
3,202,186	+				-1.7
3,202,218	-				+0.3
3,202,285	+				+0.8
3,202,285	+				-0.1
3,202,286	-				-0.3
3,202,286	-				-1.1
3,202,347	-				-0.4
3,202,507	+		Psest_3014	0.31	+2.2
3,202,507	+		Psest_3014	0.31	+0.3
3,202,507	+		Psest_3014	0.31	+0.7
3,202,660	+		Psest_3014	0.56	+0.4
3,203,001	+		Psest_3015	0.13	+0.1
3,203,002	-		Psest_3015	0.13	+0.5
3,203,034	+		Psest_3015	0.19	-0.8
3,203,034	+		Psest_3015	0.19	-1.4
3,203,034	+		Psest_3015	0.19	+0.3
3,203,035	-		Psest_3015	0.19	+1.5
3,203,035	-		Psest_3015	0.19	-1.1
3,203,035	-		Psest_3015	0.19	+1.0
3,203,035	-		Psest_3015	0.19	+0.6
3,203,038	+		Psest_3015	0.19	-0.7
3,203,038	+		Psest_3015	0.19	-0.1
3,203,039	-		Psest_3015	0.19	-0.6
3,203,095	-		Psest_3015	0.29	+0.9
3,203,121	+		Psest_3015	0.34	-0.7
3,203,171	-		Psest_3015	0.43	-1.2