Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2895

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,090,419	-		Psest_2893	0.80	-1.4
3,090,419	-		Psest_2893	0.80	-1.1
3,090,476	-		Psest_2893	0.84	-0.5
3,090,476	-		Psest_2893	0.84	-1.6
3,090,874	+				-0.8
3,090,875	-				+0.9
3,090,875	-				-1.2
3,090,875	-				-0.5
3,090,875	-				-1.2
3,090,875	-				-0.0
3,090,875	-				+1.7
3,090,875	-				-1.5
3,090,914	-				+1.5
3,090,951	-				-0.2
3,091,049	+		Psest_2894	0.25	+1.6
3,091,050	-		Psest_2894	0.25	+0.9
3,091,050	-		Psest_2894	0.25	-0.3
3,091,244	-		Psest_2894	0.76	-1.3
3,091,297	-		Psest_2894	0.90	+0.5
3,091,329	+				+1.3
3,091,330	-				+0.2
3,091,330	-				-1.5
3,091,330	-				-2.4
3,091,330	-				-0.0
3,091,334	-				+0.8
3,091,392	-				-1.5
3,091,392	-				-1.3
3,091,433	-				+0.1
3,091,619	+		Psest_2895	0.15	-0.7
3,091,619	+		Psest_2895	0.15	-1.1
3,091,682	-		Psest_2895	0.19	-0.5
3,091,682	-		Psest_2895	0.19	-1.3
3,091,778	-		Psest_2895	0.25	+0.6
3,091,820	-		Psest_2895	0.28	+1.9
3,091,823	+		Psest_2895	0.28	-1.6
3,092,096	-		Psest_2895	0.45	+0.6
3,092,471	-		Psest_2895	0.69	-1.6
3,092,621	-		Psest_2895	0.79	-1.3
3,092,621	-		Psest_2895	0.79	-0.2
3,092,661	-		Psest_2895	0.81	-1.6
3,092,661	-		Psest_2895	0.81	-1.5
3,092,661	-		Psest_2895	0.81	-0.2
3,092,690	+		Psest_2895	0.83	-0.1
3,092,691	-		Psest_2895	0.83	+1.7
3,092,691	-		Psest_2895	0.83	-0.2
3,092,691	-		Psest_2895	0.83	-0.1
3,092,695	-		Psest_2895	0.83	-0.7
3,092,713	+		Psest_2895	0.84	+0.2
3,092,713	+		Psest_2895	0.84	-0.2
3,092,713	+		Psest_2895	0.84	+0.1
3,092,713	+		Psest_2895	0.84	-0.3
3,092,714	-		Psest_2895	0.85	+0.3
3,092,714	-		Psest_2895	0.85	-0.8
3,092,809	+				-1.6
3,092,810	-				+0.6
3,092,811	+				+0.9
3,092,812	-				-0.9
3,092,815	+				+2.5
3,092,816	-				+0.1
3,092,919	-				+0.4
3,093,052	-		Psest_2896	0.10	+0.5
3,093,117	-		Psest_2896	0.17	-2.7
3,093,169	-		Psest_2896	0.22	-0.0
3,093,182	-		Psest_2896	0.23	+1.2
3,093,205	-		Psest_2896	0.25	+0.4
3,093,298	+		Psest_2896	0.34	+0.4
3,093,299	-		Psest_2896	0.35	+0.3
3,093,336	-		Psest_2896	0.38	+0.8
3,093,342	+		Psest_2896	0.39	+0.7
3,093,816	-		Psest_2896	0.86	-1.8
3,093,833	+		Psest_2896	0.87	-0.2