Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2651 and Psest_2652 are separated by 288 nucleotides Psest_2652 and Psest_2653 are separated by 131 nucleotides
Psest_2651: Psest_2651 - DNA topoisomerase I, bacterial, at 2,832,197 to 2,834,800
_2651
Psest_2652: Psest_2652 - Protein of unknown function (DUF1653)., at 2,835,089 to 2,835,322
_2652
Psest_2653: Psest_2653 - fatty oxidation complex, beta subunit FadA, at 2,835,454 to 2,836,629
_2653
Position (kb)
2835
2836 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2834.823 kb on - strand at 2835.009 kb on + strand at 2835.010 kb on - strand at 2835.010 kb on - strand at 2835.033 kb on - strand at 2835.033 kb on - strand at 2835.033 kb on - strand at 2835.033 kb on - strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.038 kb on + strand at 2835.038 kb on + strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.211 kb on - strand, within Psest_2652 at 2835.223 kb on - strand, within Psest_2652 at 2835.223 kb on - strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.292 kb on - strand, within Psest_2652 at 2835.292 kb on - strand, within Psest_2652 at 2835.396 kb on + strand at 2835.396 kb on + strand at 2835.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 2,834,823 - -0.6 2,835,009 + +0.2 2,835,010 - +1.0 2,835,010 - -1.1 2,835,033 - +2.5 2,835,033 - +0.6 2,835,033 - +1.3 2,835,033 - +1.6 2,835,034 + +0.2 2,835,034 + +0.6 2,835,034 + +0.1 2,835,034 + +1.3 2,835,034 + +0.9 2,835,034 + +1.9 2,835,034 + +0.9 2,835,034 + -1.3 2,835,034 + +0.0 2,835,034 + +0.9 2,835,034 + +1.8 2,835,034 + +0.3 2,835,035 - +1.8 2,835,035 - -0.1 2,835,035 - +0.7 2,835,035 - -0.2 2,835,035 - +0.1 2,835,035 - -0.1 2,835,035 - +1.6 2,835,035 - +0.5 2,835,035 - +1.1 2,835,035 - +1.5 2,835,035 - +1.7 2,835,035 - -0.9 2,835,035 - +0.5 2,835,035 - +0.1 2,835,035 - +0.4 2,835,035 - +1.1 2,835,035 - +0.2 2,835,035 - +1.7 2,835,035 - +1.3 2,835,035 - +0.2 2,835,035 - +0.2 2,835,035 - +0.3 2,835,035 - +0.6 2,835,035 - +1.3 2,835,035 - -0.3 2,835,035 - +2.4 2,835,035 - +1.2 2,835,035 - -0.4 2,835,035 - +1.2 2,835,036 + -0.2 2,835,036 + +1.6 2,835,036 + -0.5 2,835,036 + +1.5 2,835,036 + +1.2 2,835,036 + +1.0 2,835,036 + +1.9 2,835,036 + -1.1 2,835,036 + +0.4 2,835,036 + +0.5 2,835,036 + -1.5 2,835,036 + -0.1 2,835,036 + +0.3 2,835,036 + -0.9 2,835,036 + +0.5 2,835,036 + +0.9 2,835,036 + +0.3 2,835,036 + +0.4 2,835,036 + +0.7 2,835,036 + -0.3 2,835,036 + -3.0 2,835,037 - -0.7 2,835,037 - -0.1 2,835,037 - +1.8 2,835,037 - -0.5 2,835,037 - -0.4 2,835,037 - +2.2 2,835,037 - +1.4 2,835,037 - -0.2 2,835,037 - -2.2 2,835,037 - -1.1 2,835,037 - +0.0 2,835,037 - +0.5 2,835,037 - +0.3 2,835,037 - -0.9 2,835,037 - +1.6 2,835,037 - -0.3 2,835,037 - +0.5 2,835,037 - +0.6 2,835,037 - -0.2 2,835,037 - -0.8 2,835,037 - +3.6 2,835,037 - +1.1 2,835,037 - -0.1 2,835,037 - -0.2 2,835,038 + +2.2 2,835,038 + +1.2 2,835,039 - +0.4 2,835,039 - +1.4 2,835,039 - -0.4 2,835,039 - -0.2 2,835,039 - -1.1 2,835,039 - +0.3 2,835,211 - Psest_2652 0.52 -1.8 2,835,223 - Psest_2652 0.57 +0.6 2,835,223 - Psest_2652 0.57 -1.2 2,835,291 + Psest_2652 0.86 -1.1 2,835,291 + Psest_2652 0.86 -1.1 2,835,291 + Psest_2652 0.86 -0.8 2,835,291 + Psest_2652 0.86 -1.1 2,835,292 - Psest_2652 0.87 -0.3 2,835,292 - Psest_2652 0.87 -0.2 2,835,396 + -1.5 2,835,396 + +0.0 2,835,397 - -1.2
Or see this region's nucleotide sequence