Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2636 and Psest_2637 are separated by 112 nucleotides Psest_2637 and Psest_2638 are separated by 18 nucleotides
Psest_2636: Psest_2636 - tryptophan synthase, beta subunit, at 2,819,841 to 2,821,049
_2636
Psest_2637: Psest_2637 - putative methyltransferase, YaeB/AF_0241 family, at 2,821,162 to 2,821,869
_2637
Psest_2638: Psest_2638 - Protein related to penicillin acylase, at 2,821,888 to 2,824,425
_2638
Position (kb)
2821
2822 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2820.380 kb on + strand, within Psest_2636 at 2820.397 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.424 kb on - strand, within Psest_2636 at 2820.724 kb on - strand, within Psest_2636 at 2820.724 kb on - strand, within Psest_2636 at 2820.724 kb on - strand, within Psest_2636 at 2820.813 kb on + strand, within Psest_2636 at 2820.814 kb on - strand, within Psest_2636 at 2820.814 kb on - strand, within Psest_2636 at 2820.840 kb on + strand, within Psest_2636 at 2820.840 kb on + strand, within Psest_2636 at 2820.841 kb on - strand, within Psest_2636 at 2820.841 kb on - strand, within Psest_2636 at 2820.841 kb on - strand, within Psest_2636 at 2820.980 kb on + strand at 2820.994 kb on + strand at 2820.994 kb on + strand at 2820.994 kb on + strand at 2820.994 kb on + strand at 2820.995 kb on - strand at 2820.995 kb on - strand at 2821.023 kb on + strand at 2821.047 kb on + strand at 2821.558 kb on + strand, within Psest_2637 at 2821.559 kb on - strand, within Psest_2637 at 2821.970 kb on + strand at 2821.970 kb on + strand at 2821.970 kb on + strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2822.044 kb on - strand at 2822.044 kb on - strand at 2822.135 kb on + strand at 2822.155 kb on - strand, within Psest_2638 at 2822.195 kb on + strand, within Psest_2638 at 2822.195 kb on + strand, within Psest_2638 at 2822.239 kb on - strand, within Psest_2638 at 2822.398 kb on - strand, within Psest_2638 at 2822.460 kb on - strand, within Psest_2638 at 2822.516 kb on - strand, within Psest_2638 at 2822.564 kb on + strand, within Psest_2638 at 2822.564 kb on + strand, within Psest_2638 at 2822.565 kb on - strand, within Psest_2638 at 2822.816 kb on + strand, within Psest_2638
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 2,820,380 + Psest_2636 0.45 -0.1 2,820,397 - Psest_2636 0.46 -0.8 2,820,418 - Psest_2636 0.48 +2.6 2,820,418 - Psest_2636 0.48 +0.7 2,820,418 - Psest_2636 0.48 +3.5 2,820,418 - Psest_2636 0.48 -0.1 2,820,418 - Psest_2636 0.48 +0.7 2,820,418 - Psest_2636 0.48 -1.3 2,820,418 - Psest_2636 0.48 +0.2 2,820,424 - Psest_2636 0.48 -1.9 2,820,724 - Psest_2636 0.73 +1.6 2,820,724 - Psest_2636 0.73 -0.6 2,820,724 - Psest_2636 0.73 -0.3 2,820,813 + Psest_2636 0.80 -1.1 2,820,814 - Psest_2636 0.80 -0.2 2,820,814 - Psest_2636 0.80 -1.0 2,820,840 + Psest_2636 0.83 -1.1 2,820,840 + Psest_2636 0.83 -0.9 2,820,841 - Psest_2636 0.83 -0.8 2,820,841 - Psest_2636 0.83 +0.8 2,820,841 - Psest_2636 0.83 -0.7 2,820,980 + -0.1 2,820,994 + +0.3 2,820,994 + -0.1 2,820,994 + +0.9 2,820,994 + -0.4 2,820,995 - +0.2 2,820,995 - +0.5 2,821,023 + +0.9 2,821,047 + +0.9 2,821,558 + Psest_2637 0.56 -0.5 2,821,559 - Psest_2637 0.56 -1.4 2,821,970 + -0.4 2,821,970 + -1.5 2,821,970 + -0.4 2,821,971 - -0.1 2,821,971 - +0.5 2,821,971 - -0.2 2,821,971 - -0.6 2,821,971 - -0.1 2,821,971 - +0.3 2,821,971 - -0.3 2,821,971 - -1.8 2,822,044 - -0.1 2,822,044 - -1.3 2,822,135 + +0.8 2,822,155 - Psest_2638 0.11 -1.5 2,822,195 + Psest_2638 0.12 +0.6 2,822,195 + Psest_2638 0.12 -1.0 2,822,239 - Psest_2638 0.14 -0.2 2,822,398 - Psest_2638 0.20 -1.0 2,822,460 - Psest_2638 0.23 -1.3 2,822,516 - Psest_2638 0.25 +1.6 2,822,564 + Psest_2638 0.27 -0.7 2,822,564 + Psest_2638 0.27 +1.0 2,822,565 - Psest_2638 0.27 -0.9 2,822,816 + Psest_2638 0.37 +0.9
Or see this region's nucleotide sequence