Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2630

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,810,568	+				-0.4
2,810,568	+				+1.1
2,810,568	+				-0.9
2,810,568	+				-1.2
2,810,568	+				-0.7
2,810,568	+				-1.2
2,810,569	-				+0.1
2,810,569	-				-0.8
2,810,569	-				-1.7
2,810,569	-				+0.4
2,810,569	-				-0.3
2,810,569	-				+1.0
2,810,569	-				+1.0
2,810,569	-				+0.4
2,810,695	+		Psest_2628	0.21	-0.1
2,810,723	-		Psest_2628	0.26	+0.5
2,810,844	+		Psest_2628	0.50	-0.9
2,810,845	-		Psest_2628	0.50	+0.1
2,811,069	+				+0.3
2,811,069	+				+0.6
2,811,070	-				-0.3
2,811,070	-				-0.0
2,811,070	-				-0.3
2,811,072	+				+1.9
2,811,073	-				+2.3
2,811,073	-				+0.8
2,811,073	-				-0.1
2,811,073	-				+1.4
2,811,073	-				-1.1
2,811,079	-				+1.2
2,811,096	+				+0.4
2,811,156	-		Psest_2629	0.30	+2.3
2,811,156	-		Psest_2629	0.30	+1.4
2,811,167	+		Psest_2629	0.36	+0.1
2,811,188	+		Psest_2629	0.46	+0.3
2,811,188	+		Psest_2629	0.46	-1.0
2,811,188	+		Psest_2629	0.46	+0.1
2,811,189	-		Psest_2629	0.47	-0.7
2,811,222	+		Psest_2629	0.63	+0.4
2,811,337	+				+0.5
2,811,384	+				-0.8
2,811,384	+				-0.7
2,811,385	-				+0.0
2,811,385	-				+1.9
2,811,385	-				+3.0
2,811,451	+				+1.1
2,811,451	+				-0.3
2,811,451	+				-1.1
2,811,535	+		Psest_2630	0.34	+0.7
2,811,535	+		Psest_2630	0.34	+2.0
2,811,535	+		Psest_2630	0.34	+1.1
2,811,536	-		Psest_2630	0.35	-1.4
2,811,541	-		Psest_2630	0.38	+0.7
2,811,566	-		Psest_2630	0.53	-1.0
2,811,582	-		Psest_2630	0.63	+1.0
2,811,639	+				-0.7
2,811,639	+				+0.9
2,811,639	+				+0.4
2,811,639	+				-0.0
2,811,640	-				-0.7
2,811,642	+				+2.9
2,811,642	+				-0.9
2,811,643	-				-1.7
2,811,652	+				-1.0
2,811,653	-				+0.1
2,811,706	+				+0.5
2,811,790	-		Psest_2631	0.17	+0.6
2,811,790	-		Psest_2631	0.17	-0.1
2,811,962	+		Psest_2631	0.36	+0.9
2,811,962	+		Psest_2631	0.36	+0.9
2,811,962	+		Psest_2631	0.36	-0.5
2,811,962	+		Psest_2631	0.36	+1.3
2,811,962	+		Psest_2631	0.36	+1.5
2,811,962	+		Psest_2631	0.36	-2.0
2,811,963	-		Psest_2631	0.37	-0.2
2,811,963	-		Psest_2631	0.37	-0.8
2,811,963	-		Psest_2631	0.37	-0.7
2,811,963	-		Psest_2631	0.37	+0.5
2,811,963	-		Psest_2631	0.37	-2.3
2,812,254	-		Psest_2631	0.70	-0.6
2,812,265	+		Psest_2631	0.71	+2.2
2,812,266	-		Psest_2631	0.71	-0.8
2,812,349	+		Psest_2631	0.81	-0.5
2,812,376	+		Psest_2631	0.84	-0.3
2,812,376	+		Psest_2631	0.84	+0.7
2,812,376	+		Psest_2631	0.84	-1.8
2,812,377	-		Psest_2631	0.84	-0.2
2,812,500	-				+0.3
2,812,563	+				-1.8
2,812,614	+				+3.1
2,812,615	-				+0.8