Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2614 and Psest_2615 are separated by 22 nucleotides Psest_2615 and Psest_2616 are separated by 6 nucleotides
Psest_2614: Psest_2614 - Predicted glycosyltransferases, at 2,796,449 to 2,797,507
_2614
Psest_2615: Psest_2615 - Predicted acyltransferases, at 2,797,530 to 2,798,600
_2615
Psest_2616: Psest_2616 - Tfp pilus assembly protein PilF, at 2,798,607 to 2,799,650
_2616
Position (kb)
2797
2798
2799 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2796.542 kb on + strand at 2796.542 kb on + strand at 2796.542 kb on + strand at 2796.542 kb on + strand at 2796.543 kb on - strand at 2796.543 kb on - strand at 2796.543 kb on - strand at 2796.543 kb on - strand at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.764 kb on + strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.765 kb on - strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.768 kb on + strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.769 kb on - strand, within Psest_2614 at 2796.953 kb on + strand, within Psest_2614 at 2796.953 kb on + strand, within Psest_2614 at 2796.984 kb on - strand, within Psest_2614 at 2797.091 kb on + strand, within Psest_2614 at 2797.092 kb on - strand, within Psest_2614 at 2797.130 kb on + strand, within Psest_2614 at 2797.131 kb on - strand, within Psest_2614 at 2797.149 kb on - strand, within Psest_2614 at 2797.256 kb on + strand, within Psest_2614 at 2797.256 kb on + strand, within Psest_2614 at 2797.257 kb on - strand, within Psest_2614 at 2797.257 kb on - strand, within Psest_2614 at 2797.257 kb on - strand, within Psest_2614 at 2797.257 kb on - strand, within Psest_2614 at 2797.257 kb on - strand, within Psest_2614 at 2797.296 kb on - strand, within Psest_2614 at 2797.296 kb on - strand, within Psest_2614 at 2797.298 kb on + strand, within Psest_2614 at 2797.298 kb on + strand, within Psest_2614 at 2797.299 kb on - strand, within Psest_2614 at 2797.299 kb on - strand, within Psest_2614 at 2797.299 kb on - strand, within Psest_2614 at 2797.299 kb on - strand, within Psest_2614 at 2797.299 kb on - strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.331 kb on + strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.332 kb on - strand, within Psest_2614 at 2797.356 kb on + strand, within Psest_2614 at 2797.356 kb on + strand, within Psest_2614 at 2797.357 kb on - strand, within Psest_2614 at 2797.359 kb on - strand, within Psest_2614 at 2797.359 kb on - strand, within Psest_2614 at 2797.397 kb on + strand, within Psest_2614 at 2797.397 kb on + strand, within Psest_2614 at 2797.671 kb on + strand, within Psest_2615 at 2797.671 kb on + strand, within Psest_2615 at 2797.672 kb on - strand, within Psest_2615 at 2797.672 kb on - strand, within Psest_2615 at 2797.672 kb on - strand, within Psest_2615 at 2797.870 kb on - strand, within Psest_2615 at 2797.998 kb on + strand, within Psest_2615 at 2798.013 kb on + strand, within Psest_2615 at 2798.013 kb on + strand, within Psest_2615 at 2798.013 kb on + strand, within Psest_2615 at 2798.013 kb on + strand, within Psest_2615 at 2798.013 kb on + strand, within Psest_2615 at 2798.013 kb on + strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.014 kb on - strand, within Psest_2615 at 2798.103 kb on + strand, within Psest_2615 at 2798.118 kb on + strand, within Psest_2615 at 2798.118 kb on + strand, within Psest_2615 at 2798.119 kb on - strand, within Psest_2615 at 2798.119 kb on - strand, within Psest_2615 at 2798.172 kb on + strand, within Psest_2615 at 2798.173 kb on - strand, within Psest_2615 at 2798.191 kb on - strand, within Psest_2615 at 2798.191 kb on - strand, within Psest_2615 at 2798.191 kb on - strand, within Psest_2615 at 2798.191 kb on - strand, within Psest_2615 at 2798.191 kb on - strand, within Psest_2615 at 2798.191 kb on - strand, within Psest_2615 at 2798.308 kb on - strand, within Psest_2615 at 2798.308 kb on - strand, within Psest_2615 at 2798.380 kb on - strand, within Psest_2615 at 2798.388 kb on + strand, within Psest_2615 at 2798.389 kb on - strand, within Psest_2615 at 2798.389 kb on - strand, within Psest_2615 at 2798.389 kb on - strand, within Psest_2615 at 2798.389 kb on - strand, within Psest_2615 at 2798.706 kb on + strand at 2798.737 kb on + strand, within Psest_2616 at 2798.815 kb on + strand, within Psest_2616 at 2798.815 kb on + strand, within Psest_2616 at 2798.892 kb on - strand, within Psest_2616 at 2798.911 kb on + strand, within Psest_2616 at 2798.911 kb on + strand, within Psest_2616 at 2798.911 kb on + strand, within Psest_2616 at 2798.911 kb on + strand, within Psest_2616 at 2798.912 kb on - strand, within Psest_2616 at 2798.932 kb on + strand, within Psest_2616 at 2798.933 kb on - strand, within Psest_2616 at 2799.001 kb on + strand, within Psest_2616 at 2799.001 kb on + strand, within Psest_2616 at 2799.002 kb on - strand, within Psest_2616 at 2799.002 kb on - strand, within Psest_2616 at 2799.064 kb on + strand, within Psest_2616 at 2799.065 kb on - strand, within Psest_2616 at 2799.068 kb on - strand, within Psest_2616 at 2799.124 kb on + strand, within Psest_2616 at 2799.377 kb on + strand, within Psest_2616 at 2799.556 kb on + strand at 2799.557 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 2,796,542 + -0.5 2,796,542 + -1.6 2,796,542 + -3.0 2,796,542 + -0.3 2,796,543 - +1.9 2,796,543 - -0.6 2,796,543 - -1.4 2,796,543 - -0.1 2,796,764 + Psest_2614 0.30 -0.1 2,796,764 + Psest_2614 0.30 -0.6 2,796,764 + Psest_2614 0.30 +1.0 2,796,764 + Psest_2614 0.30 -1.4 2,796,764 + Psest_2614 0.30 -2.5 2,796,764 + Psest_2614 0.30 -0.4 2,796,764 + Psest_2614 0.30 -0.3 2,796,764 + Psest_2614 0.30 +1.7 2,796,764 + Psest_2614 0.30 -0.2 2,796,765 - Psest_2614 0.30 -0.7 2,796,765 - Psest_2614 0.30 -1.2 2,796,765 - Psest_2614 0.30 +0.5 2,796,765 - Psest_2614 0.30 -1.2 2,796,765 - Psest_2614 0.30 +1.2 2,796,765 - Psest_2614 0.30 +0.5 2,796,765 - Psest_2614 0.30 -0.8 2,796,765 - Psest_2614 0.30 -0.1 2,796,765 - Psest_2614 0.30 +1.1 2,796,768 + Psest_2614 0.30 -0.4 2,796,768 + Psest_2614 0.30 -0.4 2,796,768 + Psest_2614 0.30 -0.2 2,796,768 + Psest_2614 0.30 -1.0 2,796,768 + Psest_2614 0.30 -1.3 2,796,768 + Psest_2614 0.30 +1.3 2,796,768 + Psest_2614 0.30 +1.0 2,796,769 - Psest_2614 0.30 +0.4 2,796,769 - Psest_2614 0.30 -0.6 2,796,769 - Psest_2614 0.30 -0.1 2,796,769 - Psest_2614 0.30 -0.8 2,796,769 - Psest_2614 0.30 -0.3 2,796,769 - Psest_2614 0.30 -2.1 2,796,769 - Psest_2614 0.30 +0.2 2,796,769 - Psest_2614 0.30 +0.1 2,796,769 - Psest_2614 0.30 -1.6 2,796,769 - Psest_2614 0.30 +0.5 2,796,769 - Psest_2614 0.30 +0.7 2,796,769 - Psest_2614 0.30 -0.7 2,796,769 - Psest_2614 0.30 -0.3 2,796,769 - Psest_2614 0.30 +0.1 2,796,953 + Psest_2614 0.48 +0.4 2,796,953 + Psest_2614 0.48 +0.0 2,796,984 - Psest_2614 0.51 -1.1 2,797,091 + Psest_2614 0.61 -1.5 2,797,092 - Psest_2614 0.61 -1.9 2,797,130 + Psest_2614 0.64 +2.3 2,797,131 - Psest_2614 0.64 -1.5 2,797,149 - Psest_2614 0.66 -0.7 2,797,256 + Psest_2614 0.76 +0.7 2,797,256 + Psest_2614 0.76 +0.7 2,797,257 - Psest_2614 0.76 +1.0 2,797,257 - Psest_2614 0.76 +0.3 2,797,257 - Psest_2614 0.76 -2.2 2,797,257 - Psest_2614 0.76 -1.4 2,797,257 - Psest_2614 0.76 -0.7 2,797,296 - Psest_2614 0.80 -2.5 2,797,296 - Psest_2614 0.80 +0.2 2,797,298 + Psest_2614 0.80 -0.3 2,797,298 + Psest_2614 0.80 -0.3 2,797,299 - Psest_2614 0.80 -0.2 2,797,299 - Psest_2614 0.80 -0.5 2,797,299 - Psest_2614 0.80 -0.1 2,797,299 - Psest_2614 0.80 -1.6 2,797,299 - Psest_2614 0.80 -0.8 2,797,331 + Psest_2614 0.83 +0.9 2,797,331 + Psest_2614 0.83 -2.0 2,797,331 + Psest_2614 0.83 -1.3 2,797,331 + Psest_2614 0.83 -0.2 2,797,331 + Psest_2614 0.83 -1.2 2,797,331 + Psest_2614 0.83 -0.6 2,797,331 + Psest_2614 0.83 -1.5 2,797,331 + Psest_2614 0.83 +0.4 2,797,331 + Psest_2614 0.83 +0.5 2,797,331 + Psest_2614 0.83 -1.7 2,797,331 + Psest_2614 0.83 -0.9 2,797,331 + Psest_2614 0.83 -0.8 2,797,331 + Psest_2614 0.83 +0.5 2,797,331 + Psest_2614 0.83 +1.4 2,797,331 + Psest_2614 0.83 +0.9 2,797,331 + Psest_2614 0.83 +0.9 2,797,331 + Psest_2614 0.83 +1.2 2,797,331 + Psest_2614 0.83 +0.2 2,797,331 + Psest_2614 0.83 -0.8 2,797,331 + Psest_2614 0.83 -0.4 2,797,332 - Psest_2614 0.83 +0.1 2,797,332 - Psest_2614 0.83 -0.6 2,797,332 - Psest_2614 0.83 +1.4 2,797,332 - Psest_2614 0.83 -0.8 2,797,332 - Psest_2614 0.83 +0.5 2,797,332 - Psest_2614 0.83 +0.3 2,797,332 - Psest_2614 0.83 +0.2 2,797,332 - Psest_2614 0.83 -0.4 2,797,332 - Psest_2614 0.83 +1.0 2,797,332 - Psest_2614 0.83 +0.6 2,797,332 - Psest_2614 0.83 +0.8 2,797,332 - Psest_2614 0.83 -1.0 2,797,332 - Psest_2614 0.83 +0.1 2,797,332 - Psest_2614 0.83 +0.1 2,797,332 - Psest_2614 0.83 +0.3 2,797,332 - Psest_2614 0.83 -0.2 2,797,332 - Psest_2614 0.83 +0.3 2,797,332 - Psest_2614 0.83 +1.0 2,797,332 - Psest_2614 0.83 -0.1 2,797,332 - Psest_2614 0.83 +0.3 2,797,332 - Psest_2614 0.83 +0.5 2,797,332 - Psest_2614 0.83 +2.4 2,797,332 - Psest_2614 0.83 -0.4 2,797,332 - Psest_2614 0.83 -0.4 2,797,332 - Psest_2614 0.83 +2.2 2,797,356 + Psest_2614 0.86 +0.7 2,797,356 + Psest_2614 0.86 -0.3 2,797,357 - Psest_2614 0.86 +0.2 2,797,359 - Psest_2614 0.86 +0.1 2,797,359 - Psest_2614 0.86 -1.1 2,797,397 + Psest_2614 0.90 +0.6 2,797,397 + Psest_2614 0.90 -0.2 2,797,671 + Psest_2615 0.13 +1.6 2,797,671 + Psest_2615 0.13 -1.1 2,797,672 - Psest_2615 0.13 -1.9 2,797,672 - Psest_2615 0.13 -0.6 2,797,672 - Psest_2615 0.13 -0.3 2,797,870 - Psest_2615 0.32 -0.7 2,797,998 + Psest_2615 0.44 -1.5 2,798,013 + Psest_2615 0.45 +1.2 2,798,013 + Psest_2615 0.45 -1.2 2,798,013 + Psest_2615 0.45 +0.5 2,798,013 + Psest_2615 0.45 -0.6 2,798,013 + Psest_2615 0.45 -2.2 2,798,013 + Psest_2615 0.45 -1.2 2,798,014 - Psest_2615 0.45 +1.4 2,798,014 - Psest_2615 0.45 +2.4 2,798,014 - Psest_2615 0.45 -0.4 2,798,014 - Psest_2615 0.45 -1.3 2,798,014 - Psest_2615 0.45 +1.9 2,798,014 - Psest_2615 0.45 +1.2 2,798,014 - Psest_2615 0.45 +0.3 2,798,103 + Psest_2615 0.54 -0.1 2,798,118 + Psest_2615 0.55 -0.8 2,798,118 + Psest_2615 0.55 -0.9 2,798,119 - Psest_2615 0.55 -0.1 2,798,119 - Psest_2615 0.55 -0.4 2,798,172 + Psest_2615 0.60 -2.4 2,798,173 - Psest_2615 0.60 -0.6 2,798,191 - Psest_2615 0.62 -0.9 2,798,191 - Psest_2615 0.62 +0.3 2,798,191 - Psest_2615 0.62 -0.8 2,798,191 - Psest_2615 0.62 +0.4 2,798,191 - Psest_2615 0.62 -1.7 2,798,191 - Psest_2615 0.62 +0.3 2,798,308 - Psest_2615 0.73 +0.3 2,798,308 - Psest_2615 0.73 -1.1 2,798,380 - Psest_2615 0.79 -0.3 2,798,388 + Psest_2615 0.80 +0.2 2,798,389 - Psest_2615 0.80 +1.4 2,798,389 - Psest_2615 0.80 -0.5 2,798,389 - Psest_2615 0.80 +1.9 2,798,389 - Psest_2615 0.80 +0.1 2,798,706 + +0.3 2,798,737 + Psest_2616 0.12 +2.5 2,798,815 + Psest_2616 0.20 -0.9 2,798,815 + Psest_2616 0.20 -0.5 2,798,892 - Psest_2616 0.27 +1.3 2,798,911 + Psest_2616 0.29 -0.2 2,798,911 + Psest_2616 0.29 +0.4 2,798,911 + Psest_2616 0.29 +0.4 2,798,911 + Psest_2616 0.29 +0.8 2,798,912 - Psest_2616 0.29 -0.1 2,798,932 + Psest_2616 0.31 -0.0 2,798,933 - Psest_2616 0.31 -0.1 2,799,001 + Psest_2616 0.38 +1.9 2,799,001 + Psest_2616 0.38 -0.5 2,799,002 - Psest_2616 0.38 +0.6 2,799,002 - Psest_2616 0.38 +0.9 2,799,064 + Psest_2616 0.44 -1.4 2,799,065 - Psest_2616 0.44 -0.3 2,799,068 - Psest_2616 0.44 -1.2 2,799,124 + Psest_2616 0.50 +0.6 2,799,377 + Psest_2616 0.74 -0.4 2,799,556 + -1.1 2,799,557 - +0.5
Or see this region's nucleotide sequence