Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2395

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,547,097	+		Psest_2394	0.27	+1.9
2,547,098	-		Psest_2394	0.27	+0.1
2,547,098	-		Psest_2394	0.27	-1.0
2,547,409	+		Psest_2394	0.61	-0.3
2,547,639	+		Psest_2394	0.87	-0.2
2,547,639	+		Psest_2394	0.87	-0.9
2,547,639	+		Psest_2394	0.87	-0.4
2,547,639	+		Psest_2394	0.87	-1.0
2,547,640	-		Psest_2394	0.87	-0.2
2,547,640	-		Psest_2394	0.87	+3.2
2,547,640	-		Psest_2394	0.87	+0.5
2,547,640	-		Psest_2394	0.87	+1.9
2,547,640	-		Psest_2394	0.87	+0.4
2,547,711	+				+0.6
2,547,816	+				+0.2
2,547,817	-				-1.0
2,547,817	-				-0.5
2,547,822	+				-0.1
2,547,823	-				-1.0
2,547,823	-				+1.1
2,547,823	-				+1.4
2,547,823	-				+0.8
2,547,824	+				+0.6
2,547,824	+				-0.9
2,547,825	-				-0.6
2,547,825	-				-0.3
2,547,825	-				+1.3
2,547,926	+				+0.3
2,547,926	+				-1.1
2,547,927	-				-0.1
2,547,927	-				+1.4
2,547,928	+				-0.6
2,547,928	+				-0.6
2,547,928	+				-1.7
2,547,928	+				+0.5
2,547,928	+				-0.5
2,547,928	+				-0.4
2,547,928	+				+0.6
2,547,928	+				+0.4
2,547,928	+				-0.1
2,547,928	+				+0.6
2,547,928	+				+0.8
2,547,928	+				-0.1
2,547,928	+				-1.5
2,547,928	+				+0.9
2,547,928	+				+1.2
2,547,928	+				+0.6
2,547,928	+				+0.3
2,547,928	+				-0.8
2,547,928	+				-0.3
2,547,928	+				+0.9
2,547,928	+				+1.0
2,547,928	+				+0.8
2,547,929	-				-0.7
2,547,929	-				-0.1
2,547,929	-				-0.7
2,547,929	-				+0.5
2,547,929	-				+0.9
2,547,929	-				-0.4
2,547,929	-				+1.1
2,547,949	+				+3.0
2,547,949	+				-1.0
2,547,949	+				-1.5
2,547,949	+				-0.4
2,547,949	+				-0.4
2,547,949	+				+0.6
2,547,949	+				+1.4
2,547,949	+				-0.5
2,547,949	+				+0.9
2,547,950	-				-0.1
2,547,950	-				+0.6
2,547,950	-				+0.2
2,547,950	-				-1.4
2,547,950	-				+1.2
2,547,950	-				+0.7
2,547,950	-				+0.2
2,547,950	-				-0.1
2,547,950	-				+1.4
2,547,950	-				+0.0
2,547,950	-				+0.6
2,547,950	-				-1.3
2,547,950	-				+1.4
2,547,950	-				+1.4
2,547,950	-				-0.0
2,547,974	-				-0.1
2,547,974	-				+0.9
2,547,990	+				+2.1
2,547,996	+				-0.9
2,547,997	-				-0.4
2,548,003	-				-0.5
2,548,029	+				-0.6
2,548,214	+		Psest_2395	0.14	-1.6
2,548,390	+		Psest_2395	0.32	-0.3
2,548,390	+		Psest_2395	0.32	-0.5
2,548,458	+		Psest_2395	0.39	+0.4
2,548,585	+		Psest_2395	0.52	-0.8
2,548,586	-		Psest_2395	0.52	-0.3
2,548,586	-		Psest_2395	0.52	-0.2
2,548,660	+		Psest_2395	0.60	+0.1
2,548,666	+		Psest_2395	0.61	+1.0
2,548,667	-		Psest_2395	0.61	-1.1
2,548,667	-		Psest_2395	0.61	+0.3
2,548,667	-		Psest_2395	0.61	+0.2
2,548,762	+		Psest_2395	0.71	-0.7
2,548,978	+				-0.3
2,548,978	+				-0.2
2,548,978	+				+1.6
2,548,978	+				+1.0
2,548,978	+				-2.4
2,548,996	+				-1.4
2,548,997	-				-1.2
2,548,997	-				+0.9
2,549,206	-		Psest_2396	0.17	-0.5
2,549,562	+		Psest_2396	0.55	-1.6
2,549,562	+		Psest_2396	0.55	-0.6
2,549,562	+		Psest_2396	0.55	+1.6
2,549,562	+		Psest_2396	0.55	+1.4
2,549,562	+		Psest_2396	0.55	-1.1
2,549,562	+		Psest_2396	0.55	-1.9
2,549,563	-		Psest_2396	0.55	+0.4
2,549,563	-		Psest_2396	0.55	-1.7
2,549,563	-		Psest_2396	0.55	+2.0
2,549,760	+		Psest_2396	0.76	-0.8
2,549,761	-		Psest_2396	0.76	-1.5
2,549,861	+		Psest_2396	0.87	-0.4
2,549,861	+		Psest_2396	0.87	-0.8