Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2373 and Psest_2374 overlap by 1 nucleotides Psest_2374 and Psest_2375 overlap by 1 nucleotides Psest_2375 and Psest_2376 overlap by 4 nucleotides Psest_2376 and Psest_2377 overlap by 4 nucleotides Psest_2377 and Psest_2378 are separated by 82 nucleotides
Psest_2373: Psest_2373 - sulfur relay protein TusD/DsrE, at 2,525,516 to 2,525,908
_2373
Psest_2374: Psest_2374 - sulfur relay protein TusC/DsrF, at 2,525,908 to 2,526,267
_2374
Psest_2375: Psest_2375 - sulfur relay protein TusB/DsrH, at 2,526,267 to 2,526,569
_2375
Psest_2376: Psest_2376 - sulfur relay protein, TusE/DsrC/DsvC family, at 2,526,566 to 2,526,898
_2376
Psest_2377: Psest_2377 - Anthranilate phosphoribosyltransferase, at 2,526,895 to 2,527,878
_2377
Psest_2378: Psest_2378 - Predicted glutathione S-transferase, at 2,527,961 to 2,528,980
_2378
Position (kb)
2526
2527
2528 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2527.009 kb on - strand, within Psest_2377 at 2527.169 kb on - strand, within Psest_2377 at 2527.199 kb on - strand, within Psest_2377 at 2527.199 kb on - strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.876 kb on + strand at 2527.876 kb on + strand at 2527.877 kb on - strand at 2527.911 kb on - strand at 2527.928 kb on + strand at 2527.929 kb on - strand at 2527.974 kb on + strand at 2527.974 kb on + strand at 2527.974 kb on + strand at 2527.975 kb on - strand at 2527.975 kb on - strand at 2527.975 kb on - strand at 2527.975 kb on - strand at 2527.975 kb on - strand at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.126 kb on + strand, within Psest_2378 at 2528.127 kb on - strand, within Psest_2378 at 2528.127 kb on - strand, within Psest_2378 at 2528.127 kb on - strand, within Psest_2378 at 2528.295 kb on - strand, within Psest_2378 at 2528.309 kb on + strand, within Psest_2378 at 2528.312 kb on - strand, within Psest_2378 at 2528.312 kb on - strand, within Psest_2378 at 2528.331 kb on - strand, within Psest_2378 at 2528.532 kb on + strand, within Psest_2378 at 2528.533 kb on - strand, within Psest_2378 at 2528.533 kb on - strand, within Psest_2378 at 2528.534 kb on + strand, within Psest_2378 at 2528.567 kb on + strand, within Psest_2378 at 2528.568 kb on - strand, within Psest_2378 at 2528.636 kb on + strand, within Psest_2378 at 2528.652 kb on - strand, within Psest_2378 at 2528.708 kb on + strand, within Psest_2378 at 2528.708 kb on + strand, within Psest_2378 at 2528.709 kb on - strand, within Psest_2378 at 2528.709 kb on - strand, within Psest_2378 at 2528.709 kb on - strand, within Psest_2378 at 2528.709 kb on - strand, within Psest_2378 at 2528.783 kb on + strand, within Psest_2378 at 2528.818 kb on + strand, within Psest_2378 at 2528.819 kb on - strand, within Psest_2378 at 2528.824 kb on + strand, within Psest_2378 at 2528.838 kb on - strand, within Psest_2378 at 2528.838 kb on - strand, within Psest_2378 at 2528.840 kb on + strand, within Psest_2378 at 2528.841 kb on - strand, within Psest_2378 at 2528.841 kb on - strand, within Psest_2378
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 2,527,009 - Psest_2377 0.12 +0.7 2,527,169 - Psest_2377 0.28 -0.1 2,527,199 - Psest_2377 0.31 +0.4 2,527,199 - Psest_2377 0.31 -1.1 2,527,282 + Psest_2377 0.39 -0.7 2,527,282 + Psest_2377 0.39 -2.0 2,527,282 + Psest_2377 0.39 -1.8 2,527,282 + Psest_2377 0.39 +0.8 2,527,282 + Psest_2377 0.39 +1.7 2,527,282 + Psest_2377 0.39 +0.7 2,527,282 + Psest_2377 0.39 -1.8 2,527,283 - Psest_2377 0.39 -0.2 2,527,283 - Psest_2377 0.39 -1.5 2,527,283 - Psest_2377 0.39 -1.4 2,527,283 - Psest_2377 0.39 -0.5 2,527,283 - Psest_2377 0.39 +0.1 2,527,283 - Psest_2377 0.39 -2.0 2,527,283 - Psest_2377 0.39 +0.6 2,527,283 - Psest_2377 0.39 -0.1 2,527,283 - Psest_2377 0.39 -0.5 2,527,283 - Psest_2377 0.39 +0.1 2,527,876 + -2.0 2,527,876 + -0.3 2,527,877 - -0.6 2,527,911 - +1.9 2,527,928 + +0.2 2,527,929 - +0.3 2,527,974 + +0.1 2,527,974 + +1.1 2,527,974 + +2.9 2,527,975 - -0.3 2,527,975 - +0.9 2,527,975 - +0.4 2,527,975 - +1.8 2,527,975 - -0.7 2,528,126 + Psest_2378 0.16 +0.1 2,528,126 + Psest_2378 0.16 +2.1 2,528,126 + Psest_2378 0.16 -2.4 2,528,126 + Psest_2378 0.16 -2.2 2,528,126 + Psest_2378 0.16 -0.1 2,528,126 + Psest_2378 0.16 +1.0 2,528,126 + Psest_2378 0.16 -0.4 2,528,126 + Psest_2378 0.16 +1.7 2,528,127 - Psest_2378 0.16 +0.9 2,528,127 - Psest_2378 0.16 -0.6 2,528,127 - Psest_2378 0.16 +0.8 2,528,295 - Psest_2378 0.33 +2.3 2,528,309 + Psest_2378 0.34 -0.4 2,528,312 - Psest_2378 0.34 +2.0 2,528,312 - Psest_2378 0.34 -0.1 2,528,331 - Psest_2378 0.36 +2.7 2,528,532 + Psest_2378 0.56 -1.8 2,528,533 - Psest_2378 0.56 +0.8 2,528,533 - Psest_2378 0.56 +0.9 2,528,534 + Psest_2378 0.56 -0.6 2,528,567 + Psest_2378 0.59 -0.2 2,528,568 - Psest_2378 0.60 +0.1 2,528,636 + Psest_2378 0.66 -0.7 2,528,652 - Psest_2378 0.68 -0.3 2,528,708 + Psest_2378 0.73 -0.5 2,528,708 + Psest_2378 0.73 +0.9 2,528,709 - Psest_2378 0.73 +1.6 2,528,709 - Psest_2378 0.73 -0.9 2,528,709 - Psest_2378 0.73 -1.9 2,528,709 - Psest_2378 0.73 -1.3 2,528,783 + Psest_2378 0.81 -0.5 2,528,818 + Psest_2378 0.84 +1.3 2,528,819 - Psest_2378 0.84 +0.1 2,528,824 + Psest_2378 0.85 +2.7 2,528,838 - Psest_2378 0.86 +1.8 2,528,838 - Psest_2378 0.86 +0.4 2,528,840 + Psest_2378 0.86 -0.9 2,528,841 - Psest_2378 0.86 +0.4 2,528,841 - Psest_2378 0.86 +0.1
Or see this region's nucleotide sequence