Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2230

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,378,929	+				-0.4
2,378,930	-				-0.3
2,378,930	-				+1.6
2,378,958	+				+1.3
2,378,958	+				+1.2
2,378,958	+				+2.3
2,378,973	+				+1.7
2,378,974	-				+0.4
2,378,975	+				-0.6
2,378,975	+				-0.9
2,378,975	+				+0.8
2,378,975	+				-0.6
2,378,975	+				-1.6
2,378,975	+				+1.1
2,379,066	+				-0.0
2,379,067	-				+1.3
2,379,086	+				+1.9
2,379,086	+				+0.1
2,379,200	+				+0.8
2,379,200	+				-0.5
2,379,201	-				+1.5
2,379,201	-				-0.0
2,379,202	+				+0.7
2,379,202	+				+0.2
2,379,202	+				-0.1
2,379,202	+				+0.9
2,379,202	+				-0.3
2,379,202	+				-0.2
2,379,202	+				-1.9
2,379,202	+				+0.6
2,379,202	+				-0.6
2,379,202	+				+0.9
2,379,202	+				-0.2
2,379,202	+				+1.4
2,379,203	-				-0.9
2,379,203	-				-0.0
2,379,203	-				-0.1
2,379,203	-				+2.2
2,379,203	-				+1.5
2,379,203	-				-0.7
2,379,203	-				-0.6
2,379,203	-				-0.1
2,379,287	+				+2.2
2,379,288	-				-1.1
2,379,323	-				+1.6
2,379,326	-				+1.2
2,379,326	-				+1.3
2,379,527	+		Psest_2229	0.33	+1.9
2,379,711	+		Psest_2229	0.70	-0.1
2,379,711	+		Psest_2229	0.70	+1.3
2,379,712	-		Psest_2229	0.70	+1.0
2,379,712	-		Psest_2229	0.70	+0.2
2,379,712	-		Psest_2229	0.70	+1.4
2,379,907	-				+1.0
2,379,992	-				+0.5
2,380,025	+				+3.0
2,380,025	+				-0.2
2,380,026	-				+0.9
2,380,026	-				+0.3
2,380,026	-				+0.4
2,380,055	-		Psest_2230	0.11	+1.2
2,380,176	+		Psest_2230	0.20	-0.3
2,380,261	-		Psest_2230	0.26	+0.8
2,380,737	+		Psest_2230	0.61	+0.6
2,380,737	+		Psest_2230	0.61	+0.0
2,380,782	+		Psest_2230	0.65	-0.7
2,380,783	-		Psest_2230	0.65	+2.6
2,380,783	-		Psest_2230	0.65	+0.9
2,380,801	+		Psest_2230	0.66	+1.9
2,380,801	+		Psest_2230	0.66	-0.6
2,380,879	-		Psest_2230	0.72	-0.8
2,380,971	+		Psest_2230	0.78	+0.3
2,380,972	-		Psest_2230	0.79	+0.8
2,380,972	-		Psest_2230	0.79	-0.3
2,381,021	-		Psest_2230	0.82	+3.2
2,381,021	-		Psest_2230	0.82	+1.1
2,381,021	-		Psest_2230	0.82	+0.2
2,381,088	+		Psest_2230	0.87	+0.2
2,381,101	-		Psest_2230	0.88	+3.3
2,381,243	+				+1.0
2,381,244	-				+1.0
2,381,256	+				+1.6
2,381,265	+				-0.2
2,381,265	+				+1.2
2,381,265	+				-0.1
2,381,265	+				+1.5
2,381,265	+				-0.3
2,381,265	+				-0.2
2,381,265	+				-0.6
2,381,265	+				+2.2
2,381,265	+				+0.6
2,381,265	+				+3.4
2,381,266	-				+0.2
2,381,266	-				+0.1
2,381,266	-				+1.6
2,381,266	-				+0.9
2,381,266	-				-0.9
2,381,266	-				-1.2
2,381,266	-				+2.8
2,381,266	-				+0.1
2,381,266	-				+1.3
2,381,266	-				-0.2
2,381,266	-				+1.4
2,381,266	-				+0.2
2,381,266	-				-0.7
2,381,266	-				-0.7
2,381,266	-				+0.4
2,381,266	-				-1.6
2,381,266	-				+1.5
2,381,266	-				-0.8
2,381,266	-				+1.8
2,381,266	-				-0.4
2,381,266	-				+0.7
2,381,266	-				-0.2
2,381,266	-				-0.4
2,381,266	-				-2.0
2,381,266	-				-1.1
2,381,397	+		Psest_2231	0.15	-0.3
2,381,397	+		Psest_2231	0.15	+1.1
2,381,397	+		Psest_2231	0.15	-0.2
2,381,397	+		Psest_2231	0.15	+0.9
2,381,397	+		Psest_2231	0.15	+0.4
2,381,397	+		Psest_2231	0.15	+0.8
2,381,397	+		Psest_2231	0.15	-0.9
2,381,398	-		Psest_2231	0.15	+0.7
2,381,398	-		Psest_2231	0.15	-1.1
2,381,398	-		Psest_2231	0.15	+0.8
2,381,398	-		Psest_2231	0.15	+1.3
2,381,398	-		Psest_2231	0.15	+0.5
2,381,545	-		Psest_2231	0.50	-1.2
2,381,627	-		Psest_2231	0.69	-0.3
2,381,662	-		Psest_2231	0.78	+0.3
2,381,664	+		Psest_2231	0.78	+1.2
2,381,664	+		Psest_2231	0.78	+1.3
2,381,664	+		Psest_2231	0.78	+1.4
2,381,665	-		Psest_2231	0.78	+0.7
2,381,665	-		Psest_2231	0.78	+0.7
2,381,665	-		Psest_2231	0.78	+0.5
2,381,665	-		Psest_2231	0.78	+0.4
2,381,694	+		Psest_2231	0.85	+0.8
2,381,694	+		Psest_2231	0.85	-0.2
2,381,694	+		Psest_2231	0.85	+1.3
2,381,694	+		Psest_2231	0.85	+1.2
2,381,694	+		Psest_2231	0.85	+1.7
2,381,694	+		Psest_2231	0.85	+0.6
2,381,694	+		Psest_2231	0.85	-1.8
2,381,694	+		Psest_2231	0.85	+0.8
2,381,694	+		Psest_2231	0.85	+2.4
2,381,694	+		Psest_2231	0.85	+0.9
2,381,694	+		Psest_2231	0.85	+1.3
2,381,695	-		Psest_2231	0.85	-0.8
2,381,695	-		Psest_2231	0.85	-2.2
2,381,695	-		Psest_2231	0.85	+2.1
2,381,695	-		Psest_2231	0.85	-1.7
2,381,695	-		Psest_2231	0.85	+0.9
2,381,695	-		Psest_2231	0.85	+1.0
2,381,813	+				-0.3
2,381,813	+				-0.8
2,381,814	-				-1.5
2,381,825	+				-1.0
2,381,849	+				-2.3
2,381,849	+				-1.6
2,381,849	+				-1.8
2,381,850	-				-1.0
2,381,850	-				-1.1
2,381,850	-				-0.6
2,381,850	-				-1.1
2,381,850	-				+0.6
2,381,894	+		Psest_2232	0.12	-1.5
2,381,894	+		Psest_2232	0.12	-2.0
2,381,894	+		Psest_2232	0.12	-0.7
2,381,894	+		Psest_2232	0.12	-0.7
2,381,894	+		Psest_2232	0.12	-1.1
2,381,895	-		Psest_2232	0.12	-1.6
2,381,895	-		Psest_2232	0.12	+0.8
2,381,903	-		Psest_2232	0.13	+0.1
2,382,011	+		Psest_2232	0.26	-0.7
2,382,011	+		Psest_2232	0.26	-0.6
2,382,012	-		Psest_2232	0.26	-2.5
2,382,083	+		Psest_2232	0.35	-0.7
2,382,083	+		Psest_2232	0.35	-0.2
2,382,083	+		Psest_2232	0.35	-1.3
2,382,084	-		Psest_2232	0.35	-0.7
2,382,084	-		Psest_2232	0.35	-0.2
2,382,084	-		Psest_2232	0.35	-1.4
2,382,122	+		Psest_2232	0.39	+1.1
2,382,122	+		Psest_2232	0.39	-1.2
2,382,122	+		Psest_2232	0.39	+1.0
2,382,122	+		Psest_2232	0.39	-1.5
2,382,122	+		Psest_2232	0.39	-2.4
2,382,122	+		Psest_2232	0.39	-0.5
2,382,123	-		Psest_2232	0.40	-0.9
2,382,145	+		Psest_2232	0.42	-1.8
2,382,145	+		Psest_2232	0.42	-2.0
2,382,145	+		Psest_2232	0.42	-1.8
2,382,185	+		Psest_2232	0.47	-2.5
2,382,185	+		Psest_2232	0.47	-0.2
2,382,185	+		Psest_2232	0.47	-0.6
2,382,185	+		Psest_2232	0.47	-0.5
2,382,185	+		Psest_2232	0.47	-1.3
2,382,185	+		Psest_2232	0.47	+1.0
2,382,185	+		Psest_2232	0.47	+0.4
2,382,186	-		Psest_2232	0.47	-0.7
2,382,186	-		Psest_2232	0.47	+0.1
2,382,186	-		Psest_2232	0.47	-0.2
2,382,186	-		Psest_2232	0.47	-1.4
2,382,186	-		Psest_2232	0.47	+0.6