Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2091

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,218,403	+				+4.5
2,218,540	-				+2.2
2,218,540	-				+2.5
2,218,540	-				+3.5
2,218,540	-				+3.5
2,218,540	-				+1.9
2,218,540	-				+2.9
2,218,540	-				+2.9
2,218,540	-				+2.9
2,218,540	-				+2.5
2,218,564	-				-0.2
2,218,564	-				-0.3
2,218,653	-				+0.2
2,218,653	-				+0.1
2,218,683	+				-0.7
2,218,683	+				+0.7
2,218,684	-				+0.2
2,218,722	+				-0.4
2,218,723	-				+0.8
2,218,723	-				+0.6
2,218,730	+				+1.3
2,218,730	+				-0.9
2,218,731	-				-0.4
2,218,750	-				-0.7
2,218,750	-				+2.9
2,218,801	+				-0.1
2,218,801	+				+0.8
2,218,801	+				+1.2
2,218,801	+				-0.6
2,218,801	+				-1.7
2,218,801	+				-0.7
2,218,801	+				+0.6
2,218,802	-				+1.0
2,218,802	-				-0.7
2,218,802	-				+1.5
2,218,855	+				+0.1
2,218,893	+				-0.0
2,218,894	-				-1.5
2,218,894	-				-0.4
2,218,897	+				+1.4
2,218,897	+				+1.5
2,218,897	+				+1.1
2,218,897	+				+0.2
2,218,897	+				+0.6
2,218,898	-				+1.5
2,219,043	+		Psest_2090	0.75	+0.7
2,219,064	+		Psest_2090	0.85	+1.8
2,219,064	+		Psest_2090	0.85	-1.6
2,219,129	-				+0.5
2,219,347	+		Psest_2091	0.21	+1.0
2,219,480	-		Psest_2091	0.46	-0.5
2,219,656	+		Psest_2091	0.79	+1.4
2,219,656	+		Psest_2091	0.79	-0.7
2,219,657	-		Psest_2091	0.79	+3.2
2,219,663	-		Psest_2091	0.80	+0.8
2,219,738	-				+0.1
2,219,864	-				-0.4
2,219,864	-				+0.8
2,219,994	-		Psest_2092	0.18	-1.1
2,220,034	+		Psest_2092	0.27	+1.5
2,220,034	+		Psest_2092	0.27	+2.5
2,220,126	-		Psest_2092	0.48	-1.0
2,220,148	+		Psest_2092	0.53	-1.3
2,220,149	-		Psest_2092	0.53	+0.0
2,220,200	-		Psest_2092	0.64	-0.6
2,220,208	+		Psest_2092	0.66	-0.2
2,220,343	+				+1.6
2,220,343	+				-1.9
2,220,343	+				+0.8
2,220,343	+				-0.5
2,220,344	-				-1.6
2,220,344	-				+0.7
2,220,344	-				-0.1
2,220,344	-				+0.2
2,220,464	+				+0.8
2,220,464	+				-0.7
2,220,464	+				-0.3
2,220,464	+				-0.5
2,220,666	+		Psest_2093	0.21	+0.2
2,220,760	+		Psest_2093	0.28	+0.2
2,220,760	+		Psest_2093	0.28	-1.2
2,220,760	+		Psest_2093	0.28	+0.0
2,220,760	+		Psest_2093	0.28	+0.5
2,220,760	+		Psest_2093	0.28	+1.0
2,220,761	-		Psest_2093	0.28	+0.2
2,220,761	-		Psest_2093	0.28	+0.1
2,220,761	-		Psest_2093	0.28	+1.0
2,220,761	-		Psest_2093	0.28	-0.4