Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1879

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,988,683	+				-0.9
1,988,684	-				+1.8
1,988,684	-				-0.9
1,988,684	-				-2.0
1,988,687	+				+1.1
1,989,534	+		Psest_1878	0.85	-0.4
1,989,534	+		Psest_1878	0.85	+0.7
1,989,534	+		Psest_1878	0.85	+0.5
1,989,534	+		Psest_1878	0.85	+0.4
1,990,156	+		Psest_1879	0.33	+2.4
1,990,238	+		Psest_1879	0.39	+0.8
1,990,558	+		Psest_1879	0.61	+1.7
1,990,558	+		Psest_1879	0.61	+1.2
1,990,558	+		Psest_1879	0.61	+3.8
1,990,558	+		Psest_1879	0.61	+1.5
1,990,558	-		Psest_1879	0.61	+2.6
1,990,559	-		Psest_1879	0.61	+0.8
1,990,559	-		Psest_1879	0.61	+4.4
1,990,904	-		Psest_1879	0.85	+0.2
1,990,904	-		Psest_1879	0.85	+1.6
1,991,125	+				+2.4
1,991,126	-				+1.6
1,991,126	-				+2.1
1,991,126	-				+1.4
1,991,163	+				+1.9
1,991,258	+				+1.4
1,991,258	+				+1.0
1,991,258	+				-0.7
1,991,258	+				+1.3
1,991,259	-				-0.5
1,991,259	-				-0.1
1,991,259	-				+0.4
1,991,259	-				+2.6
1,991,259	-				+0.6
1,991,259	-				+0.7
1,991,259	-				-0.6
1,991,259	-				-2.1
1,991,259	-				+0.4
1,991,259	-				+0.6
1,991,356	+		Psest_1880	0.12	+0.4
1,991,357	-		Psest_1880	0.12	+1.3
1,991,374	+		Psest_1880	0.17	+2.0
1,991,374	+		Psest_1880	0.17	+1.0
1,991,374	+		Psest_1880	0.17	-0.2
1,991,374	+		Psest_1880	0.17	-0.7
1,991,374	+		Psest_1880	0.17	-0.1
1,991,375	-		Psest_1880	0.17	+2.2
1,991,375	-		Psest_1880	0.17	+1.6
1,991,504	+		Psest_1880	0.52	-0.3
1,991,504	+		Psest_1880	0.52	+0.0
1,991,504	+		Psest_1880	0.52	-0.1
1,991,504	+		Psest_1880	0.52	+0.6
1,991,504	+		Psest_1880	0.52	+1.4
1,991,505	-		Psest_1880	0.52	-0.3
1,991,505	-		Psest_1880	0.52	+0.0
1,991,530	+		Psest_1880	0.59	-1.7
1,991,530	+		Psest_1880	0.59	-0.4
1,991,530	+		Psest_1880	0.59	-1.4
1,991,530	+		Psest_1880	0.59	+0.3
1,991,530	+		Psest_1880	0.59	-0.9
1,991,531	-		Psest_1880	0.59	-0.7
1,991,531	-		Psest_1880	0.59	+0.4
1,991,531	-		Psest_1880	0.59	-0.6
1,991,531	-		Psest_1880	0.59	+1.1
1,991,531	-		Psest_1880	0.59	-0.3
1,991,738	+				-0.7
1,991,738	+				+0.1
1,991,763	+				+1.1