Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1804

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,900,805	-		Psest_1803	0.88	-0.0
1,901,011	+				-0.4
1,901,011	+				-2.4
1,901,011	+				-1.3
1,901,011	+				+0.5
1,901,012	-				-1.3
1,901,012	-				-0.6
1,901,012	-				+0.0
1,901,107	+				-0.7
1,901,107	+				-0.0
1,901,107	+				+2.2
1,901,107	+				+0.6
1,901,107	+				-2.0
1,901,107	+				+0.0
1,901,107	+				-2.1
1,901,107	+				+0.3
1,901,108	-				-2.3
1,901,108	-				-0.6
1,901,108	-				-0.4
1,901,108	-				+0.5
1,901,235	-				+3.2
1,901,235	-				+2.8
1,901,343	+				-0.3
1,901,344	-				+1.4
1,901,666	+		Psest_1804	0.13	+1.1
1,901,739	+		Psest_1804	0.17	+3.9
1,901,779	-		Psest_1804	0.20	+2.8
1,902,401	-		Psest_1804	0.57	+1.8
1,902,401	-		Psest_1804	0.57	+2.8
1,902,436	-		Psest_1804	0.59	+1.8
1,902,439	+		Psest_1804	0.59	+3.4
1,902,439	+		Psest_1804	0.59	+2.4
1,902,440	-		Psest_1804	0.59	+2.8
1,902,615	-		Psest_1804	0.70	+1.8
1,903,130	+				+0.2
1,903,130	+				+1.9
1,903,131	-				-0.8
1,903,135	-				+1.6
1,903,135	-				-0.0
1,903,135	-				-0.9
1,903,151	+				-2.8
1,903,151	+				+0.3
1,903,229	+				-0.9
1,903,527	+		Psest_1805	0.51	+2.4
1,903,528	-		Psest_1805	0.52	+2.8
1,903,528	-		Psest_1805	0.52	+0.9
1,903,544	-		Psest_1805	0.57	+1.4
1,903,692	+				-1.4
1,903,693	-				+0.4
1,903,693	-				+0.5
1,903,716	-				-1.2
1,903,716	-				+1.1
1,903,716	-				+0.3
1,903,716	-				-1.9
1,903,716	-				+1.1
1,903,722	+				-0.2
1,903,723	-				-0.9
1,903,803	+				+1.6
1,903,804	-				-0.5
1,903,804	-				+1.0
1,903,804	-				-1.5
1,903,804	-				+2.0
1,903,845	-				+0.6
1,903,966	-		Psest_1806	0.12	+1.1
1,903,983	+		Psest_1806	0.13	-1.6
1,903,984	-		Psest_1806	0.13	-0.0
1,903,984	-		Psest_1806	0.13	-1.4
1,904,037	+		Psest_1806	0.17	+0.6
1,904,037	+		Psest_1806	0.17	-0.5
1,904,037	+		Psest_1806	0.17	+0.9
1,904,037	+		Psest_1806	0.17	+0.2
1,904,037	+		Psest_1806	0.17	+1.1
1,904,037	+		Psest_1806	0.17	+1.7
1,904,037	+		Psest_1806	0.17	+0.0
1,904,038	-		Psest_1806	0.17	+0.3
1,904,038	-		Psest_1806	0.17	+0.0
1,904,062	+		Psest_1806	0.19	-0.5
1,904,062	+		Psest_1806	0.19	+0.7
1,904,062	+		Psest_1806	0.19	-0.6
1,904,063	-		Psest_1806	0.19	+0.6
1,904,091	+		Psest_1806	0.21	+0.6
1,904,091	+		Psest_1806	0.21	+0.6
1,904,091	+		Psest_1806	0.21	-0.5
1,904,092	-		Psest_1806	0.21	-0.0
1,904,092	-		Psest_1806	0.21	+0.2
1,904,092	-		Psest_1806	0.21	+0.1