Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1643

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,746,952	+		Psest_1642	0.53	+1.9
1,746,953	-		Psest_1642	0.54	-1.6
1,746,953	-		Psest_1642	0.54	-0.2
1,746,955	+		Psest_1642	0.54	+2.9
1,746,955	+		Psest_1642	0.54	+0.7
1,746,956	-		Psest_1642	0.54	-0.3
1,746,956	-		Psest_1642	0.54	-0.1
1,746,956	-		Psest_1642	0.54	-0.4
1,747,265	+				+0.7
1,747,336	-		Psest_1643	0.15	+0.1
1,747,336	-		Psest_1643	0.15	+1.4
1,747,577	+				+0.4
1,747,578	-				-0.8
1,747,691	+				+0.3
1,747,691	+				-0.4
1,747,691	+				-2.5
1,747,691	+				-0.6
1,747,691	+				+1.0
1,747,692	-				-0.1
1,747,881	+		Psest_1644	0.24	-0.2
1,747,882	-		Psest_1644	0.24	+0.2
1,747,882	-		Psest_1644	0.24	-0.1
1,747,882	-		Psest_1644	0.24	+0.9
1,748,150	+		Psest_1644	0.44	-0.4
1,748,151	-		Psest_1644	0.44	+1.7
1,748,166	-		Psest_1644	0.45	+0.5
1,748,166	-		Psest_1644	0.45	-0.5
1,748,182	+		Psest_1644	0.47	+2.4
1,748,183	-		Psest_1644	0.47	-0.7
1,748,183	-		Psest_1644	0.47	+0.6
1,748,183	-		Psest_1644	0.47	+0.2
1,748,237	+		Psest_1644	0.51	-2.0
1,748,238	-		Psest_1644	0.51	-0.5
1,748,325	-		Psest_1644	0.57	+0.5
1,748,363	+		Psest_1644	0.60	+1.2
1,748,420	-		Psest_1644	0.64	-1.2