Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1496
Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.00390625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,597,435 | + | +0.3 | |||
1,597,435 | + | +2.7 | |||
1,597,435 | + | -0.9 | |||
1,597,436 | - | +1.3 | |||
1,597,520 | + | -0.6 | |||
1,597,521 | - | +1.4 | |||
1,597,537 | - | +1.0 | |||
1,597,540 | + | +0.6 | |||
1,597,540 | + | +2.5 | |||
1,598,113 | - | +0.9 | |||
1,598,332 | + | Psest_1496 | 0.29 | +2.6 | |
1,598,333 | - | Psest_1496 | 0.29 | +1.7 | |
1,598,333 | - | Psest_1496 | 0.29 | +1.4 | |
1,598,760 | + | -1.5 | |||
1,598,760 | + | -0.6 | |||
1,598,760 | + | -0.5 | |||
1,598,760 | + | -1.3 | |||
1,598,761 | - | +2.6 | |||
1,599,446 | - | Psest_1497 | 0.65 | +1.2 |
Or see this region's nucleotide sequence