Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1453

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,561,570	+		Psest_1452	0.59	-0.1
1,561,570	+		Psest_1452	0.59	-0.6
1,561,570	+		Psest_1452	0.59	+0.1
1,561,570	+		Psest_1452	0.59	+1.0
1,561,570	+		Psest_1452	0.59	+0.4
1,561,570	+		Psest_1452	0.59	+0.2
1,561,570	+		Psest_1452	0.59	+1.1
1,561,571	-		Psest_1452	0.59	-0.4
1,561,571	-		Psest_1452	0.59	-0.3
1,561,571	-		Psest_1452	0.59	-1.9
1,561,571	-		Psest_1452	0.59	-1.1
1,561,571	-		Psest_1452	0.59	-2.1
1,561,571	-		Psest_1452	0.59	-0.0
1,561,572	+		Psest_1452	0.59	+0.4
1,561,572	+		Psest_1452	0.59	+1.5
1,561,573	-		Psest_1452	0.59	+1.2
1,561,600	+		Psest_1452	0.61	-0.1
1,561,600	+		Psest_1452	0.61	+3.0
1,561,600	+		Psest_1452	0.61	-1.1
1,561,667	+		Psest_1452	0.63	+0.6
1,561,668	-		Psest_1452	0.63	+0.8
1,561,668	-		Psest_1452	0.63	+1.9
1,561,708	+		Psest_1452	0.65	+1.8
1,561,708	+		Psest_1452	0.65	-0.4
1,561,708	+		Psest_1452	0.65	-1.3
1,561,708	+		Psest_1452	0.65	+0.6
1,561,766	-		Psest_1452	0.68	+1.0
1,561,766	-		Psest_1452	0.68	-0.2
1,561,766	-		Psest_1452	0.68	+1.1
1,561,798	+		Psest_1452	0.69	+1.4
1,562,081	-		Psest_1452	0.81	+1.8
1,562,161	+		Psest_1452	0.85	+0.7
1,562,161	+		Psest_1452	0.85	-1.3
1,562,162	-		Psest_1452	0.85	+0.1
1,562,162	-		Psest_1452	0.85	-0.2
1,562,162	-		Psest_1452	0.85	-0.1
1,562,162	-		Psest_1452	0.85	-0.2
1,562,303	-				-0.5
1,562,723	+		Psest_1453	0.11	+1.6
1,563,080	+		Psest_1453	0.34	-0.5
1,563,143	+		Psest_1453	0.38	-1.0
1,563,143	+		Psest_1453	0.38	-0.3
1,563,143	+		Psest_1453	0.38	-0.4
1,563,143	+		Psest_1453	0.38	+0.8
1,563,143	+		Psest_1453	0.38	+0.9
1,563,144	-		Psest_1453	0.38	-0.1
1,563,144	-		Psest_1453	0.38	-1.8
1,563,209	+		Psest_1453	0.42	+0.6
1,563,258	-		Psest_1453	0.45	+1.1
1,563,258	-		Psest_1453	0.45	+0.1
1,563,345	-		Psest_1453	0.51	-2.0
1,563,345	-		Psest_1453	0.51	-0.9
1,563,345	-		Psest_1453	0.51	+1.7
1,563,345	-		Psest_1453	0.51	+1.5
1,563,362	+		Psest_1453	0.52	-0.9
1,563,362	+		Psest_1453	0.52	-0.1
1,563,363	-		Psest_1453	0.52	+0.5
1,563,363	-		Psest_1453	0.52	-0.3
1,563,620	-		Psest_1453	0.69	+0.1
1,563,620	-		Psest_1453	0.69	-0.3
1,563,620	-		Psest_1453	0.69	-0.9
1,563,657	-		Psest_1453	0.71	-1.7
1,563,756	-		Psest_1453	0.77	+0.7
1,563,793	+		Psest_1453	0.80	-1.2
1,563,793	+		Psest_1453	0.80	-1.7
1,563,793	+		Psest_1453	0.80	-0.8
1,563,794	-		Psest_1453	0.80	-1.8
1,563,794	-		Psest_1453	0.80	+1.0
1,563,914	+		Psest_1453	0.88	-0.0
1,563,939	+		Psest_1453	0.89	+1.9
1,563,940	-		Psest_1453	0.89	-1.9
1,563,940	-		Psest_1453	0.89	-0.7
1,564,067	+				-0.5
1,564,067	+				-1.9
1,564,112	+				-1.6
1,564,113	-				+0.6
1,564,115	-				-0.5
1,564,115	-				+1.6
1,564,115	-				-0.2
1,564,115	-				-0.2
1,564,115	-				+1.1
1,564,115	-				-0.5
1,564,115	-				+0.3
1,564,115	-				-0.3
1,564,115	-				+0.6
1,564,119	-				-1.3
1,564,119	-				-0.5
1,564,163	-				+1.2
1,564,168	+				-0.0
1,564,234	+		Psest_1454	0.12	+0.5
1,564,235	-		Psest_1454	0.12	+1.5
1,564,235	-		Psest_1454	0.12	-0.5
1,564,235	-		Psest_1454	0.12	-0.9
1,564,262	-		Psest_1454	0.18	+1.6
1,564,262	-		Psest_1454	0.18	+2.2
1,564,549	+		Psest_1454	0.79	-0.1
1,564,549	+		Psest_1454	0.79	+0.9
1,564,549	+		Psest_1454	0.79	+1.1
1,564,549	+		Psest_1454	0.79	-0.1
1,564,549	+		Psest_1454	0.79	+0.2
1,564,549	+		Psest_1454	0.79	+0.6
1,564,549	+		Psest_1454	0.79	+1.1
1,564,549	+		Psest_1454	0.79	+1.6
1,564,549	+		Psest_1454	0.79	+0.3
1,564,549	+		Psest_1454	0.79	-1.6
1,564,549	+		Psest_1454	0.79	-0.8
1,564,550	-		Psest_1454	0.79	+0.5
1,564,550	-		Psest_1454	0.79	+1.3
1,564,550	-		Psest_1454	0.79	+0.7
1,564,550	-		Psest_1454	0.79	-1.9
1,564,550	-		Psest_1454	0.79	-0.1
1,564,550	-		Psest_1454	0.79	-1.8
1,564,550	-		Psest_1454	0.79	+1.6
1,564,550	-		Psest_1454	0.79	-1.1
1,564,550	-		Psest_1454	0.79	+1.8
1,564,612	-				+0.8
1,564,612	-				-1.0
1,564,612	-				+2.5
1,564,646	-				-0.6
1,564,735	+				-1.8