Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4317

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
4,516,202	+		Psest_4316	0.21	-1.6
4,516,202	+		Psest_4316	0.21	+1.0
4,516,203	-		Psest_4316	0.22	-0.8
4,516,203	-		Psest_4316	0.22	+1.4
4,516,268	+		Psest_4316	0.30	-0.8
4,516,346	+		Psest_4316	0.40	+1.7
4,516,346	+		Psest_4316	0.40	-0.6
4,516,604	+		Psest_4316	0.74	+1.3
4,516,604	+		Psest_4316	0.74	-1.3
4,516,605	-		Psest_4316	0.74	-2.6
4,516,778	+				-2.4
4,516,779	-				+1.6
4,516,871	+				-1.0
4,516,872	-				-0.3
4,516,910	+				-1.5
4,516,987	+				+0.0
4,517,006	+				+1.5
4,517,006	+				+0.4
4,517,007	-				-1.5
4,517,007	-				+0.7
4,517,010	+				+0.1
4,517,010	+				-0.6
4,517,010	+				-1.4
4,517,010	+				-0.2
4,517,010	+				-1.0
4,517,011	-				-1.1
4,517,029	+				-0.1
4,517,029	+				+0.9
4,517,029	+				-1.1
4,517,029	+				+1.4
4,517,029	+				-3.0
4,517,029	+				-1.9
4,517,029	+				-0.9
4,517,029	+				+0.7
4,517,029	+				-0.6
4,517,029	+				-0.2
4,517,029	+				-1.1
4,517,029	+				-0.5
4,517,029	+				-1.1
4,517,030	-				+2.4
4,517,030	-				-0.6
4,517,030	-				-0.6
4,517,030	-				+0.5
4,517,030	-				-1.0
4,517,030	-				-0.9
4,517,030	-				-1.8
4,517,030	-				+1.3
4,517,030	-				-0.4
4,517,030	-				-1.2
4,517,030	-				-1.3
4,517,030	-				-0.7
4,517,030	-				-2.4
4,517,081	+				+0.4
4,517,082	-				+0.5
4,517,082	-				-0.9
4,517,082	-				-0.7
4,517,106	+				+1.0
4,517,106	+				-1.0
4,517,107	-				-0.6
4,517,107	-				+0.2
4,517,140	+				-1.9
4,517,140	+				+0.5
4,517,140	+				+1.2
4,517,140	+				+0.3
4,517,141	-				-1.8
4,517,141	-				-1.3
4,517,141	-				-1.3
4,517,141	-				+0.2
4,517,141	-				-1.4
4,517,141	-				+0.2
4,517,141	-				-0.4
4,517,141	-				+0.9
4,517,359	-		Psest_4317	0.20	-0.9
4,517,374	+		Psest_4317	0.22	+0.9
4,517,463	+		Psest_4317	0.31	-0.1
4,517,463	+		Psest_4317	0.31	+0.5
4,517,463	+		Psest_4317	0.31	+0.7
4,517,463	+		Psest_4317	0.31	-0.8
4,517,463	+		Psest_4317	0.31	+1.2
4,517,463	+		Psest_4317	0.31	+0.4
4,517,463	+		Psest_4317	0.31	-1.2
4,517,463	+		Psest_4317	0.31	+0.8
4,517,463	+		Psest_4317	0.31	+0.8
4,517,463	+		Psest_4317	0.31	-0.6
4,517,464	-		Psest_4317	0.31	-0.1
4,517,464	-		Psest_4317	0.31	-0.4
4,517,464	-		Psest_4317	0.31	+0.4
4,517,464	-		Psest_4317	0.31	-2.9
4,517,464	-		Psest_4317	0.31	+0.3
4,517,464	-		Psest_4317	0.31	+1.2
4,517,464	-		Psest_4317	0.31	-0.7
4,517,464	-		Psest_4317	0.31	-1.9
4,517,464	-		Psest_4317	0.31	-2.0
4,517,464	-		Psest_4317	0.31	+0.7
4,517,581	-		Psest_4317	0.43	-0.1
4,517,620	+		Psest_4317	0.47	+0.0
4,517,621	-		Psest_4317	0.47	-1.3
4,517,643	+		Psest_4317	0.49	-1.5
4,517,644	-		Psest_4317	0.49	-0.1
4,517,781	+		Psest_4317	0.63	-0.3
4,517,781	+		Psest_4317	0.63	-1.0
4,517,781	+		Psest_4317	0.63	-0.7
4,517,782	-		Psest_4317	0.63	-0.4
4,517,782	-		Psest_4317	0.63	-1.6
4,517,859	+		Psest_4317	0.71	-1.3
4,517,860	-		Psest_4317	0.71	-0.8
4,518,122	+				-0.1
4,518,207	+				+0.4
4,518,207	+				+0.2
4,518,208	-				-0.5
4,518,208	-				+0.9
4,518,242	+				-0.2
4,518,242	+				-0.3
4,518,242	+				+1.8
4,518,242	+				+0.2
4,518,242	+				-0.6
4,518,242	+				-0.1
4,518,243	-				+0.9
4,518,243	-				-1.5
4,518,243	-				-0.6
4,518,243	-				-0.3
4,518,243	-				+1.0
4,518,243	-				+0.0
4,518,243	-				-0.3
4,518,243	-				-0.2
4,518,306	+		Psest_4318	0.15	+0.2
4,518,306	+		Psest_4318	0.15	+0.9
4,518,307	-		Psest_4318	0.15	+0.0
4,518,382	+		Psest_4318	0.33	+0.0
4,518,383	-		Psest_4318	0.33	-0.8
4,518,383	-		Psest_4318	0.33	-3.3
4,518,383	-		Psest_4318	0.33	-0.3
4,518,455	-		Psest_4318	0.50	-1.4
4,518,552	+		Psest_4318	0.73	+2.2
4,518,552	+		Psest_4318	0.73	-0.0
4,518,552	+		Psest_4318	0.73	-1.9
4,518,553	-		Psest_4318	0.73	-0.1
4,518,715	+				+1.6
4,518,715	+				+1.2
4,518,716	-				+1.0
4,518,716	-				+0.4
4,518,716	-				+0.3
4,518,716	-				-1.9
4,518,716	-				-0.1
4,518,716	-				-0.5
4,518,716	-				-1.1
4,518,716	-				-1.8
4,518,716	-				-0.3
4,518,716	-				-1.6
4,518,716	-				+0.3
4,518,716	-				+0.7
4,518,730	+		Psest_4319	0.10	+0.4
4,518,731	-		Psest_4319	0.10	+1.0
4,518,731	-		Psest_4319	0.10	-0.5
4,518,793	+		Psest_4319	0.22	+1.9
4,518,793	+		Psest_4319	0.22	+0.8
4,518,793	+		Psest_4319	0.22	-1.2
4,518,793	+		Psest_4319	0.22	-0.4
4,518,793	+		Psest_4319	0.22	-1.6
4,518,793	+		Psest_4319	0.22	-2.2
4,518,793	+		Psest_4319	0.22	+1.3
4,518,794	-		Psest_4319	0.22	-1.5
4,518,997	+		Psest_4319	0.60	+0.6