Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4174

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
4,351,699	+		Psest_4172	0.74	+0.4
4,351,699	+		Psest_4172	0.74	-2.0
4,351,700	-		Psest_4172	0.74	-0.4
4,351,700	-		Psest_4172	0.74	+0.4
4,351,945	+		Psest_4172	0.88	-2.1
4,351,946	-		Psest_4172	0.88	+1.1
4,351,946	-		Psest_4172	0.88	-1.7
4,352,024	+				+1.4
4,352,024	+				-1.6
4,352,024	+				-1.2
4,352,024	+				+1.0
4,352,144	+				+2.4
4,352,144	+				+0.1
4,352,144	+				+0.4
4,352,144	+				+1.7
4,352,145	-				-0.0
4,352,145	-				+4.1
4,352,145	-				+1.3
4,352,898	+		Psest_4174	0.28	-1.2
4,352,898	+		Psest_4174	0.28	-0.9
4,352,899	-		Psest_4174	0.28	-1.8
4,352,899	-		Psest_4174	0.28	+0.0
4,353,346	-		Psest_4174	0.60	+0.8
4,353,546	+		Psest_4174	0.74	-0.2
4,353,546	+		Psest_4174	0.74	+3.1
4,353,620	+		Psest_4174	0.79	-2.0
4,353,620	+		Psest_4174	0.79	-0.4
4,353,620	+		Psest_4174	0.79	-1.4
4,353,620	+		Psest_4174	0.79	-1.6
4,353,620	+		Psest_4174	0.79	-1.2
4,353,620	+		Psest_4174	0.79	+0.1
4,353,620	+		Psest_4174	0.79	-0.8
4,353,620	+		Psest_4174	0.79	+2.1
4,353,620	+		Psest_4174	0.79	+0.7
4,353,620	+		Psest_4174	0.79	+1.7
4,353,620	+		Psest_4174	0.79	+1.3
4,353,620	+		Psest_4174	0.79	+0.9
4,353,620	+		Psest_4174	0.79	+3.5
4,353,620	+		Psest_4174	0.79	+0.3
4,353,620	+		Psest_4174	0.79	+1.6
4,353,621	-		Psest_4174	0.79	-0.6
4,353,621	-		Psest_4174	0.79	+2.0
4,353,621	-		Psest_4174	0.79	+1.6
4,353,621	-		Psest_4174	0.79	+3.6
4,353,621	-		Psest_4174	0.79	-1.6
4,353,621	-		Psest_4174	0.79	+1.3
4,353,621	-		Psest_4174	0.79	-1.5
4,353,621	-		Psest_4174	0.79	-0.8
4,353,621	-		Psest_4174	0.79	+0.7
4,353,621	-		Psest_4174	0.79	+0.5
4,353,621	-		Psest_4174	0.79	+0.1
4,353,621	-		Psest_4174	0.79	-0.7
4,353,621	-		Psest_4174	0.79	+1.7
4,353,621	-		Psest_4174	0.79	-2.0
4,353,621	-		Psest_4174	0.79	+1.0
4,353,621	-		Psest_4174	0.79	-0.6
4,353,621	-		Psest_4174	0.79	+2.0
4,353,621	-		Psest_4174	0.79	+1.2
4,353,621	-		Psest_4174	0.79	+0.3
4,353,621	-		Psest_4174	0.79	+2.7
4,353,621	-		Psest_4174	0.79	-1.5
4,353,621	-		Psest_4174	0.79	+1.0
4,353,621	-		Psest_4174	0.79	+1.8
4,353,621	-		Psest_4174	0.79	+1.6
4,353,621	-		Psest_4174	0.79	+0.5
4,353,660	+		Psest_4174	0.82	-1.4
4,353,660	+		Psest_4174	0.82	-1.3
4,353,660	+		Psest_4174	0.82	-1.2
4,353,660	+		Psest_4174	0.82	+1.2
4,353,660	+		Psest_4174	0.82	-1.7
4,353,660	+		Psest_4174	0.82	+1.1
4,353,661	-		Psest_4174	0.82	+1.0
4,353,661	-		Psest_4174	0.82	-1.3
4,353,661	-		Psest_4174	0.82	+0.3
4,353,661	-		Psest_4174	0.82	+0.9
4,353,661	-		Psest_4174	0.82	+2.3
4,353,661	-		Psest_4174	0.82	-1.0
4,353,661	-		Psest_4174	0.82	+0.7
4,353,661	-		Psest_4174	0.82	+2.1
4,353,661	-		Psest_4174	0.82	-0.8
4,353,661	-		Psest_4174	0.82	+0.5
4,353,661	-		Psest_4174	0.82	+0.3
4,353,661	-		Psest_4174	0.82	-0.2
4,353,661	-		Psest_4174	0.82	-0.7
4,353,661	-		Psest_4174	0.82	-0.8
4,353,661	-		Psest_4174	0.82	-1.4
4,353,661	-		Psest_4174	0.82	+0.5
4,353,662	+		Psest_4174	0.82	-0.5
4,353,662	+		Psest_4174	0.82	+0.9
4,353,662	+		Psest_4174	0.82	-0.3
4,353,662	+		Psest_4174	0.82	+0.4
4,353,662	+		Psest_4174	0.82	+0.9
4,353,662	+		Psest_4174	0.82	-0.1
4,353,662	+		Psest_4174	0.82	+1.7
4,353,662	+		Psest_4174	0.82	+0.1
4,353,662	+		Psest_4174	0.82	+1.4
4,353,662	+		Psest_4174	0.82	-0.4
4,353,663	-		Psest_4174	0.82	-0.2
4,353,663	-		Psest_4174	0.82	-0.7
4,353,663	-		Psest_4174	0.82	-0.9
4,353,663	-		Psest_4174	0.82	-0.5
4,353,663	-		Psest_4174	0.82	-0.6
4,353,663	-		Psest_4174	0.82	+0.6
4,353,663	-		Psest_4174	0.82	+0.8
4,353,663	-		Psest_4174	0.82	-0.6
4,353,663	-		Psest_4174	0.82	+2.4
4,353,663	-		Psest_4174	0.82	+0.7
4,353,663	-		Psest_4174	0.82	+1.9
4,353,663	-		Psest_4174	0.82	-1.4
4,353,663	-		Psest_4174	0.82	-0.7
4,353,663	-		Psest_4174	0.82	+1.5
4,353,663	-		Psest_4174	0.82	+0.9
4,353,663	-		Psest_4174	0.82	-1.5
4,353,663	-		Psest_4174	0.82	+2.2
4,353,663	-		Psest_4174	0.82	+1.3
4,353,663	-		Psest_4174	0.82	+0.1
4,353,663	-		Psest_4174	0.82	+1.6
4,353,663	-		Psest_4174	0.82	-0.8
4,353,860	+				+1.5
4,353,860	+				-0.7
4,353,860	+				+0.8
4,353,861	-				-0.7
4,353,876	+				-0.2
4,353,876	+				+0.1
4,353,876	+				-1.9
4,353,876	+				-1.0
4,353,877	-				-0.1
4,353,877	-				+0.5
4,353,895	+				-0.1
4,354,080	-				+0.2
4,354,117	+				-0.2
4,354,199	+				-1.0
4,354,309	-				-0.6
4,354,374	-				-0.1
4,354,420	+		Psest_4175	0.12	-0.3
4,354,420	+		Psest_4175	0.12	-0.3
4,354,421	-		Psest_4175	0.12	-0.5
4,354,421	-		Psest_4175	0.12	-1.1
4,354,421	-		Psest_4175	0.12	-0.0
4,354,424	+		Psest_4175	0.12	-0.2
4,354,424	+		Psest_4175	0.12	-1.0
4,354,425	-		Psest_4175	0.12	-2.2
4,354,425	-		Psest_4175	0.12	-0.5
4,354,425	-		Psest_4175	0.12	-1.4
4,354,425	-		Psest_4175	0.12	-0.3
4,354,425	-		Psest_4175	0.12	-2.2
4,354,465	+		Psest_4175	0.17	-0.2
4,354,550	-		Psest_4175	0.27	-0.6
4,354,550	-		Psest_4175	0.27	-1.6
4,354,600	-		Psest_4175	0.33	-0.1
4,354,600	-		Psest_4175	0.33	-2.6
4,354,637	+		Psest_4175	0.38	+0.1
4,354,637	+		Psest_4175	0.38	-0.3
4,354,638	-		Psest_4175	0.38	-0.7
4,354,665	+		Psest_4175	0.41	-1.3
4,354,665	+		Psest_4175	0.41	+1.5
4,354,665	+		Psest_4175	0.41	-3.1
4,354,715	+		Psest_4175	0.47	-0.8
4,354,716	-		Psest_4175	0.47	-0.9
4,354,777	+		Psest_4175	0.54	+0.3
4,354,798	+		Psest_4175	0.57	+0.2
4,354,798	+		Psest_4175	0.57	-1.0
4,354,798	+		Psest_4175	0.57	-0.3
4,354,798	+		Psest_4175	0.57	-0.5
4,354,799	-		Psest_4175	0.57	-1.0
4,354,799	-		Psest_4175	0.57	+2.1
4,354,817	-		Psest_4175	0.59	-2.7
4,354,817	-		Psest_4175	0.59	+1.6
4,354,817	-		Psest_4175	0.59	+0.7
4,354,817	-		Psest_4175	0.59	+1.0
4,354,817	-		Psest_4175	0.59	-0.9
4,354,827	+		Psest_4175	0.60	-0.6
4,354,827	+		Psest_4175	0.60	+0.1
4,354,852	+		Psest_4175	0.63	-0.5
4,354,852	+		Psest_4175	0.63	+0.2
4,354,852	+		Psest_4175	0.63	+0.7
4,354,852	+		Psest_4175	0.63	+0.2
4,354,852	+		Psest_4175	0.63	-1.1
4,354,852	+		Psest_4175	0.63	+0.5
4,354,852	+		Psest_4175	0.63	+0.9
4,354,852	+		Psest_4175	0.63	-2.1
4,354,853	-		Psest_4175	0.63	-0.3
4,354,853	-		Psest_4175	0.63	+0.5
4,354,853	-		Psest_4175	0.63	-0.9
4,354,853	-		Psest_4175	0.63	+0.7
4,354,853	-		Psest_4175	0.63	+2.0
4,354,853	-		Psest_4175	0.63	-0.9
4,354,853	-		Psest_4175	0.63	+0.5
4,354,853	-		Psest_4175	0.63	-0.3
4,354,853	-		Psest_4175	0.63	+0.5
4,354,853	-		Psest_4175	0.63	+0.7
4,354,853	-		Psest_4175	0.63	-0.3
4,354,853	-		Psest_4175	0.63	+0.9
4,354,853	-		Psest_4175	0.63	+0.1
4,354,853	-		Psest_4175	0.63	-0.6
4,354,853	-		Psest_4175	0.63	+0.1
4,354,858	+		Psest_4175	0.64	-0.5
4,354,858	+		Psest_4175	0.64	-2.5
4,354,858	+		Psest_4175	0.64	-0.5
4,354,859	-		Psest_4175	0.64	+0.2
4,354,859	-		Psest_4175	0.64	-1.2
4,354,859	-		Psest_4175	0.64	+0.7
4,354,859	-		Psest_4175	0.64	-2.6
4,354,859	-		Psest_4175	0.64	-1.3
4,354,859	-		Psest_4175	0.64	-0.7