Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3158

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
3,326,767	+				+1.5
3,326,768	-				-0.4
3,326,768	-				+0.6
3,326,807	+				+1.6
3,326,808	-				-1.7
3,326,811	+				+1.1
3,326,811	+				+1.0
3,326,811	+				+0.2
3,326,812	-				+1.5
3,326,874	+				-0.2
3,326,875	-				-1.1
3,326,893	+				-0.7
3,326,893	+				-0.5
3,326,893	+				+2.3
3,326,893	+				-1.2
3,326,893	+				-0.3
3,326,893	+				+1.5
3,326,893	+				-0.1
3,326,893	+				+0.1
3,326,893	+				+2.4
3,326,893	+				-0.1
3,326,893	+				-1.1
3,326,893	+				-0.1
3,326,893	+				-1.8
3,326,893	+				-1.9
3,326,893	+				-1.4
3,326,893	+				-1.2
3,326,893	+				+3.0
3,326,893	+				-2.4
3,326,893	+				+1.3
3,326,893	+				-0.6
3,326,893	+				-0.5
3,326,893	+				+1.2
3,326,893	+				-1.9
3,326,893	+				-2.0
3,326,893	+				-0.9
3,326,893	+				-0.4
3,326,893	+				+0.9
3,326,893	+				+1.5
3,326,893	+				+1.0
3,326,893	+				+2.4
3,326,893	+				+1.1
3,326,893	+				+1.2
3,326,893	+				-0.3
3,326,893	+				+1.6
3,326,893	+				-0.6
3,326,893	+				-0.6
3,326,893	+				+0.9
3,326,893	+				+1.2
3,326,893	+				-1.1
3,326,893	+				+2.0
3,326,893	+				-0.6
3,326,894	-				-1.2
3,326,894	-				+0.4
3,326,894	-				+0.5
3,326,894	-				-0.5
3,326,894	-				+0.0
3,326,894	-				+2.3
3,326,894	-				+0.8
3,326,894	-				+0.0
3,326,894	-				+1.3
3,326,894	-				+0.3
3,326,894	-				-2.4
3,326,894	-				+2.0
3,326,894	-				+1.2
3,326,894	-				+1.0
3,326,894	-				+0.7
3,326,894	-				-1.2
3,326,894	-				+2.7
3,326,894	-				+0.2
3,326,894	-				-0.3
3,326,894	-				+1.8
3,326,894	-				+0.3
3,326,894	-				+2.1
3,326,894	-				+0.2
3,326,894	-				+1.2
3,326,894	-				+1.5
3,326,894	-				+1.0
3,326,894	-				+1.3
3,326,894	-				-0.5
3,326,894	-				+0.8
3,326,894	-				+2.1
3,326,894	-				+2.9
3,326,894	-				+2.9
3,326,894	-				+2.3
3,326,895	+				+0.1
3,326,895	+				-0.3
3,326,895	+				-0.1
3,326,896	-				-1.2
3,326,896	-				+1.1
3,326,896	-				-0.1
3,326,897	+				-0.1
3,326,897	+				+1.6
3,326,897	+				+0.1
3,326,897	+				+2.0
3,326,898	-				+0.2
3,326,898	-				+1.1
3,326,898	-				-0.8
3,326,898	-				+1.1
3,326,898	-				+2.7
3,326,898	-				+1.8
3,326,898	-				+1.6
3,326,937	+				-3.1
3,326,937	+				-0.5
3,326,981	+				+1.6
3,326,981	+				-1.6
3,326,981	+				+1.1
3,326,981	+				-2.1
3,326,982	-				-0.0
3,326,982	-				-0.5
3,327,016	-				+1.0
3,327,058	+				+2.1
3,327,058	+				+0.0
3,327,058	+				+0.6
3,327,058	+				+0.1
3,327,059	-				+1.5
3,327,059	-				-0.2
3,327,059	-				+0.3
3,327,059	-				+1.9
3,327,059	-				-1.7
3,327,059	-				-0.4
3,327,064	+				+0.5
3,327,104	-		Psest_3157	0.18	+1.0
3,327,104	-		Psest_3157	0.18	-0.8
3,327,104	-		Psest_3157	0.18	+0.8
3,327,179	+		Psest_3157	0.66	+0.0
3,327,180	-		Psest_3157	0.67	-0.7
3,327,180	-		Psest_3157	0.67	-1.0
3,327,180	-		Psest_3157	0.67	+0.0
3,327,185	+		Psest_3157	0.70	+0.4
3,327,185	+		Psest_3157	0.70	+0.3
3,327,185	+		Psest_3157	0.70	-0.9
3,327,186	-		Psest_3157	0.71	-0.5
3,327,186	-		Psest_3157	0.71	-1.1
3,327,186	-		Psest_3157	0.71	+0.8
3,327,186	-		Psest_3157	0.71	+1.1
3,327,186	-		Psest_3157	0.71	+0.4
3,327,214	+		Psest_3157	0.88	+0.4
3,327,215	-		Psest_3157	0.89	+3.2
3,327,231	+				+1.5
3,327,232	-				+3.1
3,327,312	-				+1.3
3,327,344	+				+0.6
3,327,350	+				+2.0
3,327,350	+				-0.8
3,327,351	-				+0.2
3,327,351	-				+2.3
3,327,351	-				+1.2
3,327,571	+				+3.8
3,327,571	+				+0.7
3,327,680	+				-0.5
3,327,684	+				+2.2
3,327,685	-				-1.2
3,327,739	+				-1.3
3,327,739	+				+2.6
3,327,739	+				+0.6
3,327,740	-				+0.2
3,327,740	-				-1.1
3,327,740	-				+2.3
3,327,786	+				+1.5
3,327,787	-				-1.4
3,327,820	-		Psest_3158	0.17	+1.6
3,327,848	+		Psest_3158	0.26	-1.0
3,327,848	+		Psest_3158	0.26	+1.8
3,327,848	+		Psest_3158	0.26	+0.7
3,327,848	+		Psest_3158	0.26	-1.6
3,327,848	+		Psest_3158	0.26	-0.8
3,327,849	-		Psest_3158	0.27	+1.2
3,327,849	-		Psest_3158	0.27	+1.1
3,327,849	-		Psest_3158	0.27	-1.9
3,327,879	+		Psest_3158	0.36	+1.4
3,327,924	-		Psest_3158	0.51	+1.0
3,328,045	+		Psest_3158	0.89	+2.2
3,328,091	+				+1.9
3,328,103	-				+1.9
3,328,129	+				-2.5
3,328,129	+				+0.8
3,328,130	-				+1.9
3,328,161	+				+0.6
3,328,161	+				+3.2
3,328,161	+				+0.5
3,328,161	+				+0.0
3,328,162	-				-2.5
3,328,359	+				-0.8
3,328,359	+				+0.1
3,328,360	-				-1.8
3,328,360	-				-0.5
3,328,375	+				-1.9
3,328,375	+				+0.6
3,328,392	-				-0.6
3,328,392	-				+0.6
3,328,392	-				+0.0
3,328,628	+				-0.5
3,328,884	+		Psest_3159	0.11	+1.2
3,329,072	-		Psest_3159	0.15	-0.7