Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2106

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
2,235,521	+				-0.2
2,235,522	-				+1.6
2,235,522	-				-0.2
2,235,738	-		Psest_2105	0.28	+1.9
2,235,840	-		Psest_2105	0.38	-1.0
2,235,840	-		Psest_2105	0.38	+0.4
2,235,840	-		Psest_2105	0.38	-0.2
2,235,840	-		Psest_2105	0.38	+0.0
2,235,874	-		Psest_2105	0.41	+0.2
2,235,874	-		Psest_2105	0.41	+0.6
2,236,047	+		Psest_2105	0.59	-0.1
2,236,047	+		Psest_2105	0.59	-0.0
2,236,067	-		Psest_2105	0.61	-0.5
2,236,067	-		Psest_2105	0.61	+2.9
2,236,067	-		Psest_2105	0.61	-1.6
2,236,067	-		Psest_2105	0.61	-1.2
2,236,122	-		Psest_2105	0.67	+1.4
2,236,141	-		Psest_2105	0.69	+0.0
2,236,157	-		Psest_2105	0.70	+2.1
2,236,157	-		Psest_2105	0.70	-2.9
2,236,265	+		Psest_2105	0.81	+1.0
2,236,299	-		Psest_2105	0.85	-0.4
2,236,348	+		Psest_2105	0.90	-1.9
2,236,349	-		Psest_2105	0.90	-0.5
2,236,349	-		Psest_2105	0.90	+0.5
2,236,439	+				+0.5
2,236,623	-		Psest_2106	0.18	-2.1
2,236,743	+		Psest_2106	0.30	+1.5
2,236,744	-		Psest_2106	0.31	+1.4
2,236,776	+		Psest_2106	0.34	-3.0
2,236,777	-		Psest_2106	0.34	-1.4
2,236,777	-		Psest_2106	0.34	-0.7
2,236,777	-		Psest_2106	0.34	+0.9
2,236,777	-		Psest_2106	0.34	+0.5
2,236,831	+		Psest_2106	0.40	+0.6
2,236,831	+		Psest_2106	0.40	+0.3
2,236,832	-		Psest_2106	0.40	-3.2
2,236,832	-		Psest_2106	0.40	-1.6
2,236,845	+		Psest_2106	0.41	+1.6
2,236,846	-		Psest_2106	0.41	-1.4
2,236,861	+		Psest_2106	0.43	-1.2
2,236,941	+		Psest_2106	0.51	+1.1
2,236,942	-		Psest_2106	0.51	+1.2
2,236,942	-		Psest_2106	0.51	-0.7
2,237,061	+		Psest_2106	0.64	+1.2
2,237,061	+		Psest_2106	0.64	-1.8
2,237,061	+		Psest_2106	0.64	-1.4
2,237,061	+		Psest_2106	0.64	-0.3
2,237,061	+		Psest_2106	0.64	+0.2
2,237,061	+		Psest_2106	0.64	+0.4
2,237,062	-		Psest_2106	0.64	+3.4
2,237,062	-		Psest_2106	0.64	+1.9
2,237,062	-		Psest_2106	0.64	+1.9
2,237,062	-		Psest_2106	0.64	+2.2
2,237,062	-		Psest_2106	0.64	+0.1
2,237,062	-		Psest_2106	0.64	+1.3
2,237,062	-		Psest_2106	0.64	-3.3
2,237,062	-		Psest_2106	0.64	+1.8
2,237,062	-		Psest_2106	0.64	+0.2
2,237,358	+				+1.3
2,237,358	+				+1.1
2,237,358	+				-0.4
2,237,358	+				+0.6
2,237,359	-				+0.5
2,237,359	-				+0.0
2,237,359	-				-1.2
2,237,359	-				-0.2
2,237,359	-				-0.6
2,237,359	-				-2.2
2,237,359	-				-0.8
2,237,359	-				-1.4
2,237,567	+		Psest_2107	0.14	+0.5
2,237,568	-		Psest_2107	0.14	-1.4
2,237,569	+		Psest_2107	0.14	+1.5
2,237,569	+		Psest_2107	0.14	+1.9
2,237,569	+		Psest_2107	0.14	+0.5
2,237,569	+		Psest_2107	0.14	-1.6
2,237,569	+		Psest_2107	0.14	-0.6
2,237,569	+		Psest_2107	0.14	-2.0
2,237,569	+		Psest_2107	0.14	-1.0
2,237,569	+		Psest_2107	0.14	+0.7
2,237,569	+		Psest_2107	0.14	-2.0
2,237,569	+		Psest_2107	0.14	+0.4
2,237,569	+		Psest_2107	0.14	-0.4
2,237,570	-		Psest_2107	0.14	-0.9
2,237,570	-		Psest_2107	0.14	-0.9
2,237,570	-		Psest_2107	0.14	-0.3
2,237,570	-		Psest_2107	0.14	+1.4
2,237,570	-		Psest_2107	0.14	+0.9
2,237,570	-		Psest_2107	0.14	+1.9
2,237,654	+		Psest_2107	0.23	-1.3
2,237,655	-		Psest_2107	0.23	-0.8
2,237,655	-		Psest_2107	0.23	+1.3
2,237,757	+		Psest_2107	0.34	+0.4
2,237,757	+		Psest_2107	0.34	-1.0
2,237,761	+		Psest_2107	0.34	-0.4
2,237,761	+		Psest_2107	0.34	+3.0
2,237,762	-		Psest_2107	0.34	+0.3
2,237,888	+		Psest_2107	0.48	+1.1
2,237,889	-		Psest_2107	0.48	-0.1
2,237,963	+		Psest_2107	0.56	-1.9
2,237,983	+		Psest_2107	0.58	-0.7
2,237,984	-		Psest_2107	0.58	+1.3
2,237,984	-		Psest_2107	0.58	+2.8
2,238,157	+		Psest_2107	0.76	-0.4
2,238,157	+		Psest_2107	0.76	-0.3
2,238,157	+		Psest_2107	0.76	+1.1
2,238,270	+		Psest_2107	0.88	-1.0
2,238,271	-		Psest_2107	0.88	+2.0
2,238,271	-		Psest_2107	0.88	-0.2
2,238,271	-		Psest_2107	0.88	-0.3
2,238,271	-		Psest_2107	0.88	-0.2
2,238,280	+		Psest_2107	0.89	-1.1
2,238,291	+				+0.1
2,238,358	+				-0.4
2,238,358	+				-0.8
2,238,358	+				-0.9
2,238,359	-				+0.3
2,238,359	-				+1.4