Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2085

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
2,213,223	+				-0.4
2,213,223	+				-1.4
2,213,223	+				+0.9
2,213,223	+				-0.6
2,213,223	+				+0.9
2,213,224	-				-0.3
2,213,224	-				-3.0
2,213,272	-				-0.4
2,213,272	-				-1.8
2,213,272	-				+0.8
2,213,390	-		Psest_2084	0.25	-0.3
2,213,555	+		Psest_2084	0.48	+0.2
2,213,555	+		Psest_2084	0.48	-0.5
2,213,555	+		Psest_2084	0.48	+0.7
2,213,555	+		Psest_2084	0.48	+0.0
2,213,556	-		Psest_2084	0.48	-0.3
2,213,556	-		Psest_2084	0.48	+2.5
2,213,556	-		Psest_2084	0.48	-1.9
2,213,556	-		Psest_2084	0.48	-0.9
2,213,556	-		Psest_2084	0.48	+1.1
2,213,556	-		Psest_2084	0.48	-0.9
2,213,607	+		Psest_2084	0.56	+2.9
2,213,811	-		Psest_2084	0.85	+0.8
2,213,861	+				-0.8
2,213,903	+				-0.3
2,213,903	+				+0.4
2,213,903	+				+1.1
2,213,903	+				-0.0
2,213,904	-				-1.2
2,213,953	+				+2.1
2,214,092	+				-1.3
2,214,092	+				-0.4
2,214,092	+				-2.5
2,214,093	-				+3.1
2,214,095	+				+1.2
2,214,095	+				-0.1
2,214,095	+				-2.0
2,214,096	-				-0.8
2,214,096	-				-2.4
2,214,096	-				-0.4
2,214,251	+		Psest_2085	0.15	-0.7
2,214,516	-		Psest_2085	0.41	-0.5
2,214,605	+		Psest_2085	0.50	+1.4
2,214,749	+		Psest_2085	0.64	+1.1
2,214,824	-		Psest_2085	0.71	+0.3
2,214,962	+		Psest_2085	0.84	+0.1
2,215,007	+		Psest_2085	0.89	+0.8
2,215,007	+		Psest_2085	0.89	-0.5
2,215,007	+		Psest_2085	0.89	+0.6
2,215,007	+		Psest_2085	0.89	+0.4
2,215,007	+		Psest_2085	0.89	-1.0
2,215,007	+		Psest_2085	0.89	-0.6
2,215,007	+		Psest_2085	0.89	-0.8
2,215,008	-		Psest_2085	0.89	-1.1
2,215,008	-		Psest_2085	0.89	-0.1
2,215,008	-		Psest_2085	0.89	-1.2
2,215,008	-		Psest_2085	0.89	-0.8
2,215,008	-		Psest_2085	0.89	-1.5
2,215,008	-		Psest_2085	0.89	-1.0
2,215,011	+		Psest_2085	0.89	-1.0
2,215,011	+		Psest_2085	0.89	-0.7
2,215,012	-		Psest_2085	0.89	-0.4
2,215,012	-		Psest_2085	0.89	-1.3
2,215,012	-		Psest_2085	0.89	-1.2
2,215,012	-		Psest_2085	0.89	+1.8
2,215,060	+				+1.3
2,215,153	+				-0.3
2,215,251	+		Psest_2086	0.12	-0.8
2,215,280	-		Psest_2086	0.15	+0.5
2,215,314	+		Psest_2086	0.18	-0.5
2,215,446	+		Psest_2086	0.31	+0.4
2,215,516	+		Psest_2086	0.38	+0.5
2,215,517	-		Psest_2086	0.39	+2.2
2,215,628	+		Psest_2086	0.50	-0.9
2,215,659	+		Psest_2086	0.53	-0.3
2,215,661	+		Psest_2086	0.53	-1.2
2,215,661	+		Psest_2086	0.53	+1.4
2,215,661	+		Psest_2086	0.53	+1.1
2,215,661	+		Psest_2086	0.53	+0.5
2,215,661	+		Psest_2086	0.53	+0.2
2,215,661	+		Psest_2086	0.53	+1.6
2,215,662	-		Psest_2086	0.53	+1.0
2,215,662	-		Psest_2086	0.53	-1.1
2,215,662	-		Psest_2086	0.53	+0.9
2,215,675	+		Psest_2086	0.54	-2.1
2,215,916	+		Psest_2086	0.79	-1.8
2,215,916	+		Psest_2086	0.79	+0.5
2,216,113	+				+0.1
2,216,113	+				-0.8
2,216,114	-				+0.2