Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1861

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
1,964,159	+		Psest_1859	0.89	-1.1
1,964,159	+		Psest_1859	0.89	-2.4
1,964,160	-		Psest_1859	0.89	-1.1
1,964,160	-		Psest_1859	0.89	+0.9
1,964,160	-		Psest_1859	0.89	-2.4
1,964,250	-				+0.3
1,964,268	+				-2.0
1,964,545	+		Psest_1860	0.38	-1.1
1,964,545	+		Psest_1860	0.38	+0.8
1,964,546	-		Psest_1860	0.38	-0.8
1,964,664	+		Psest_1860	0.58	+1.5
1,964,881	+				-1.6
1,964,946	+				+0.7
1,964,947	-				+1.2
1,964,997	+				-0.2
1,964,997	+				+1.4
1,964,997	+				-0.5
1,964,997	+				+1.6
1,964,998	-				-2.9
1,964,998	-				-0.6
1,964,998	-				+1.3
1,964,998	-				-0.3
1,965,118	-		Psest_1861	0.13	+0.0
1,965,124	+		Psest_1861	0.13	-1.3
1,965,124	+		Psest_1861	0.13	-0.2
1,965,124	+		Psest_1861	0.13	-0.5
1,965,125	-		Psest_1861	0.13	+1.4
1,965,198	+		Psest_1861	0.19	-0.6
1,965,198	+		Psest_1861	0.19	-0.4
1,965,198	+		Psest_1861	0.19	-0.5
1,965,199	-		Psest_1861	0.19	+0.2
1,965,267	-		Psest_1861	0.24	-0.5
1,965,333	-		Psest_1861	0.29	-0.7
1,965,333	-		Psest_1861	0.29	-0.3
1,965,381	-		Psest_1861	0.32	-1.1
1,965,457	+		Psest_1861	0.38	-1.0
1,965,457	+		Psest_1861	0.38	-1.0
1,965,457	+		Psest_1861	0.38	+0.4
1,965,457	+		Psest_1861	0.38	+1.1
1,965,458	-		Psest_1861	0.38	+1.5
1,965,458	-		Psest_1861	0.38	+0.9
1,965,458	-		Psest_1861	0.38	+0.3
1,965,458	-		Psest_1861	0.38	+0.1
1,965,600	-		Psest_1861	0.48	-0.4
1,965,651	-		Psest_1861	0.52	-1.8
1,965,686	-		Psest_1861	0.55	-0.0
1,965,706	-		Psest_1861	0.56	-1.0
1,965,706	-		Psest_1861	0.56	-0.8
1,965,811	-		Psest_1861	0.64	+0.4
1,965,811	-		Psest_1861	0.64	+1.7
1,966,026	+		Psest_1861	0.80	-1.9
1,966,027	-		Psest_1861	0.80	+0.2
1,966,027	-		Psest_1861	0.80	-1.4
1,966,129	-		Psest_1861	0.88	+1.4
1,966,129	-		Psest_1861	0.88	-0.6
1,966,158	-		Psest_1861	0.90	-0.9
1,966,236	+				-0.3
1,966,237	-				+0.2
1,966,343	+				+0.6
1,966,496	+				-0.3
1,966,771	+				-0.1
1,966,771	+				+0.9
1,966,771	+				-0.9
1,966,771	+				-2.0
1,966,837	+				-1.2
1,966,837	+				-0.6
1,966,878	-				-0.7
1,966,953	+				-0.3
1,966,983	-				+0.2
1,966,986	+				+0.9
1,966,986	+				-1.7
1,966,986	+				-1.4
1,966,986	+				+2.0
1,966,986	+				-0.8
1,966,986	+				+0.3
1,966,986	+				-0.8
1,966,986	+				+1.4
1,966,986	+				+0.6
1,966,986	+				-2.0
1,966,986	+				+1.3
1,966,986	+				+0.5
1,966,986	+				-0.1
1,966,986	+				-0.5
1,966,986	+				-2.1
1,966,986	+				-0.7
1,966,986	+				-0.3
1,966,986	+				-0.2
1,966,987	-				+0.2
1,966,987	-				-0.1
1,966,987	-				+1.1
1,966,987	-				-1.7
1,966,987	-				-0.6
1,966,987	-				+0.3
1,966,987	-				+2.3
1,966,987	-				+0.0
1,966,987	-				+0.3
1,966,987	-				+0.3
1,966,987	-				-1.1
1,966,987	-				-0.8
1,966,987	-				+0.5
1,966,988	+				-1.7
1,966,988	+				+0.5
1,966,988	+				-0.2
1,966,988	+				-1.1
1,966,988	+				+1.1
1,966,988	+				-0.6
1,966,988	+				-0.9
1,966,989	-				+0.4
1,966,989	-				+0.8
1,966,992	+				+0.1
1,966,992	+				+1.0
1,966,992	+				+0.3
1,966,992	+				-0.5
1,966,993	-				+0.6
1,966,993	-				+0.5
1,966,993	-				-1.6
1,966,993	-				+0.3
1,966,993	-				-0.1
1,966,993	-				-0.0
1,966,993	-				-0.7
1,966,993	-				+1.3
1,966,993	-				+0.1
1,966,993	-				+0.2
1,966,993	-				+1.5
1,966,993	-				-0.1
1,967,064	+				+1.3
1,967,065	-				+1.7
1,967,065	-				+0.7