Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2281 and Psest_2282 overlap by 8 nucleotides Psest_2282 and Psest_2283 are separated by 102 nucleotides Psest_2283 and Psest_2284 are separated by 205 nucleotides Psest_2284 and Psest_2285 are separated by 130 nucleotides
Psest_2281: Psest_2281 - Phosphoserine aminotransferase, at 2,429,259 to 2,430,359
_2281
Psest_2282: Psest_2282 - Dihydroorotate dehydrogenase, at 2,430,352 to 2,431,197
_2282
Psest_2283: Psest_2283 - Parvulin-like peptidyl-prolyl isomerase, at 2,431,300 to 2,433,156
_2283
Psest_2284: Psest_2284 - Bacterial nucleoid DNA-binding protein, at 2,433,362 to 2,433,634
_2284
Psest_2285: Psest_2285 - ATP-dependent protease La, at 2,433,765 to 2,436,161
_2285
Position (kb)
2431
2432
2433
2434 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2430.347 kb on + strand at 2430.348 kb on - strand at 2430.357 kb on + strand at 2430.358 kb on - strand at 2430.479 kb on + strand, within Psest_2282 at 2430.479 kb on + strand, within Psest_2282 at 2430.722 kb on - strand, within Psest_2282 at 2430.866 kb on + strand, within Psest_2282 at 2430.939 kb on - strand, within Psest_2282 at 2433.364 kb on - strand at 2433.364 kb on - strand at 2433.364 kb on - strand at 2433.683 kb on - strand at 2433.683 kb on - strand at 2433.698 kb on - strand at 2433.706 kb on - strand at 2433.767 kb on - strand at 2433.860 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 2,430,347 + +1.1 2,430,348 - -0.5 2,430,357 + -0.4 2,430,358 - -0.2 2,430,479 + Psest_2282 0.15 -0.8 2,430,479 + Psest_2282 0.15 +1.9 2,430,722 - Psest_2282 0.44 +0.9 2,430,866 + Psest_2282 0.61 +1.8 2,430,939 - Psest_2282 0.69 +0.3 2,433,364 - +1.6 2,433,364 - +1.7 2,433,364 - -1.5 2,433,683 - +1.6 2,433,683 - +2.8 2,433,698 - +0.0 2,433,706 - +0.2 2,433,767 - +2.7 2,433,860 - -0.6
Or see this region's nucleotide sequence