Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2271 and Psest_2272 are separated by 93 nucleotides Psest_2272 and Psest_2273 are separated by 86 nucleotides Psest_2273 and Psest_2274 are separated by 46 nucleotides Psest_2274 and Psest_2275 are separated by 178 nucleotides
Psest_2271: Psest_2271 - coenzyme PQQ biosynthesis protein PqqD, at 2,421,435 to 2,421,713
_2271
Psest_2272: Psest_2272 - coenzyme PQQ biosynthesis protein C, at 2,421,807 to 2,422,559
_2272
Psest_2273: Psest_2273 - coenzyme PQQ biosynthesis protein B, at 2,422,646 to 2,423,557
_2273
Psest_2274: Psest_2274 - coenzyme PQQ biosynthesis protein A, at 2,423,604 to 2,423,675
_2274
Psest_2275: Psest_2275 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 2,423,854 to 2,424,972
_2275
Position (kb)
2422
2423
2424 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2421.731 kb on + strand at 2421.731 kb on + strand at 2421.809 kb on - strand at 2421.857 kb on - strand at 2421.877 kb on + strand at 2421.877 kb on + strand at 2421.877 kb on + strand at 2421.944 kb on + strand, within Psest_2272 at 2421.944 kb on + strand, within Psest_2272 at 2421.944 kb on + strand, within Psest_2272 at 2421.944 kb on + strand, within Psest_2272 at 2421.944 kb on + strand, within Psest_2272 at 2421.944 kb on + strand, within Psest_2272 at 2421.945 kb on - strand, within Psest_2272 at 2421.945 kb on - strand, within Psest_2272 at 2421.945 kb on - strand, within Psest_2272 at 2422.039 kb on + strand, within Psest_2272 at 2422.086 kb on - strand, within Psest_2272 at 2422.180 kb on + strand, within Psest_2272 at 2422.180 kb on + strand, within Psest_2272 at 2422.181 kb on - strand, within Psest_2272 at 2422.181 kb on - strand, within Psest_2272 at 2422.181 kb on - strand, within Psest_2272 at 2422.181 kb on - strand, within Psest_2272 at 2422.395 kb on - strand, within Psest_2272 at 2422.409 kb on - strand, within Psest_2272 at 2422.409 kb on - strand, within Psest_2272 at 2422.409 kb on - strand, within Psest_2272 at 2422.462 kb on + strand, within Psest_2272 at 2422.462 kb on + strand, within Psest_2272 at 2422.462 kb on + strand, within Psest_2272 at 2422.462 kb on + strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.463 kb on - strand, within Psest_2272 at 2422.495 kb on + strand at 2422.495 kb on + strand at 2422.496 kb on - strand at 2422.498 kb on + strand at 2422.498 kb on + strand at 2422.498 kb on + strand at 2422.498 kb on + strand at 2422.499 kb on - strand at 2422.908 kb on - strand, within Psest_2273 at 2422.971 kb on + strand, within Psest_2273 at 2422.971 kb on + strand, within Psest_2273 at 2422.972 kb on - strand, within Psest_2273 at 2422.993 kb on + strand, within Psest_2273 at 2422.993 kb on + strand, within Psest_2273 at 2422.993 kb on + strand, within Psest_2273 at 2422.994 kb on - strand, within Psest_2273 at 2423.072 kb on - strand, within Psest_2273 at 2423.072 kb on - strand, within Psest_2273 at 2423.092 kb on + strand, within Psest_2273 at 2423.285 kb on + strand, within Psest_2273 at 2423.285 kb on + strand, within Psest_2273 at 2423.285 kb on + strand, within Psest_2273 at 2423.286 kb on - strand, within Psest_2273 at 2423.286 kb on - strand, within Psest_2273 at 2423.540 kb on + strand at 2423.540 kb on + strand at 2423.540 kb on + strand at 2423.620 kb on + strand, within Psest_2274 at 2423.620 kb on + strand, within Psest_2274 at 2423.620 kb on + strand, within Psest_2274 at 2423.621 kb on - strand, within Psest_2274 at 2423.621 kb on - strand, within Psest_2274 at 2423.621 kb on - strand, within Psest_2274 at 2423.621 kb on - strand, within Psest_2274 at 2423.666 kb on + strand, within Psest_2274 at 2423.667 kb on - strand, within Psest_2274 at 2423.667 kb on - strand, within Psest_2274 at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.676 kb on - strand at 2423.693 kb on - strand at 2423.693 kb on - strand at 2423.722 kb on + strand at 2423.723 kb on - strand at 2423.723 kb on - strand at 2423.723 kb on - strand at 2423.723 kb on - strand at 2423.740 kb on + strand at 2423.753 kb on + strand at 2423.785 kb on - strand at 2423.812 kb on + strand at 2423.812 kb on + strand at 2423.813 kb on - strand at 2423.813 kb on - strand at 2423.974 kb on - strand, within Psest_2275 at 2423.974 kb on - strand, within Psest_2275 at 2424.014 kb on - strand, within Psest_2275 at 2424.046 kb on + strand, within Psest_2275 at 2424.292 kb on - strand, within Psest_2275
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 2,421,731 + +2.8 2,421,731 + -1.3 2,421,809 - -0.1 2,421,857 - +0.3 2,421,877 + -0.3 2,421,877 + +0.4 2,421,877 + +0.2 2,421,944 + Psest_2272 0.18 +1.2 2,421,944 + Psest_2272 0.18 -1.0 2,421,944 + Psest_2272 0.18 +2.2 2,421,944 + Psest_2272 0.18 +1.0 2,421,944 + Psest_2272 0.18 -1.1 2,421,944 + Psest_2272 0.18 +1.4 2,421,945 - Psest_2272 0.18 -0.2 2,421,945 - Psest_2272 0.18 +0.3 2,421,945 - Psest_2272 0.18 +0.2 2,422,039 + Psest_2272 0.31 -1.2 2,422,086 - Psest_2272 0.37 +0.4 2,422,180 + Psest_2272 0.50 +0.2 2,422,180 + Psest_2272 0.50 -2.4 2,422,181 - Psest_2272 0.50 -1.2 2,422,181 - Psest_2272 0.50 +0.8 2,422,181 - Psest_2272 0.50 +0.2 2,422,181 - Psest_2272 0.50 -0.5 2,422,395 - Psest_2272 0.78 -2.3 2,422,409 - Psest_2272 0.80 -1.3 2,422,409 - Psest_2272 0.80 -0.7 2,422,409 - Psest_2272 0.80 +0.1 2,422,462 + Psest_2272 0.87 +0.6 2,422,462 + Psest_2272 0.87 -1.3 2,422,462 + Psest_2272 0.87 -0.5 2,422,462 + Psest_2272 0.87 -0.1 2,422,463 - Psest_2272 0.87 -1.7 2,422,463 - Psest_2272 0.87 -1.0 2,422,463 - Psest_2272 0.87 +0.4 2,422,463 - Psest_2272 0.87 -1.2 2,422,463 - Psest_2272 0.87 -1.4 2,422,463 - Psest_2272 0.87 +1.0 2,422,463 - Psest_2272 0.87 +1.2 2,422,463 - Psest_2272 0.87 +0.9 2,422,463 - Psest_2272 0.87 +0.4 2,422,463 - Psest_2272 0.87 -1.1 2,422,495 + -0.5 2,422,495 + +0.2 2,422,496 - -0.5 2,422,498 + -0.8 2,422,498 + -2.2 2,422,498 + +1.2 2,422,498 + -0.4 2,422,499 - +0.3 2,422,908 - Psest_2273 0.29 +0.1 2,422,971 + Psest_2273 0.36 +1.0 2,422,971 + Psest_2273 0.36 +1.2 2,422,972 - Psest_2273 0.36 -0.8 2,422,993 + Psest_2273 0.38 -0.5 2,422,993 + Psest_2273 0.38 -0.6 2,422,993 + Psest_2273 0.38 +2.8 2,422,994 - Psest_2273 0.38 +0.4 2,423,072 - Psest_2273 0.47 +2.2 2,423,072 - Psest_2273 0.47 +1.1 2,423,092 + Psest_2273 0.49 +0.2 2,423,285 + Psest_2273 0.70 +1.8 2,423,285 + Psest_2273 0.70 +0.6 2,423,285 + Psest_2273 0.70 +2.1 2,423,286 - Psest_2273 0.70 +0.1 2,423,286 - Psest_2273 0.70 -0.5 2,423,540 + -0.7 2,423,540 + +1.0 2,423,540 + +1.2 2,423,620 + Psest_2274 0.22 -1.3 2,423,620 + Psest_2274 0.22 +1.0 2,423,620 + Psest_2274 0.22 -0.1 2,423,621 - Psest_2274 0.24 -0.2 2,423,621 - Psest_2274 0.24 +1.3 2,423,621 - Psest_2274 0.24 -2.9 2,423,621 - Psest_2274 0.24 -0.2 2,423,666 + Psest_2274 0.86 +0.1 2,423,667 - Psest_2274 0.88 -0.1 2,423,667 - Psest_2274 0.88 -1.0 2,423,676 - +0.0 2,423,676 - -0.5 2,423,676 - +1.8 2,423,676 - +1.8 2,423,676 - -1.6 2,423,676 - -0.1 2,423,676 - +0.3 2,423,676 - +0.2 2,423,676 - +0.4 2,423,676 - -0.9 2,423,676 - +0.7 2,423,676 - +2.5 2,423,676 - -0.5 2,423,693 - +1.8 2,423,693 - +1.5 2,423,722 + -1.1 2,423,723 - +1.2 2,423,723 - +1.1 2,423,723 - +0.1 2,423,723 - -1.2 2,423,740 + -1.8 2,423,753 + -0.7 2,423,785 - +1.9 2,423,812 + +0.9 2,423,812 + -1.3 2,423,813 - +0.2 2,423,813 - -0.1 2,423,974 - Psest_2275 0.11 +0.9 2,423,974 - Psest_2275 0.11 +1.3 2,424,014 - Psest_2275 0.14 -1.0 2,424,046 + Psest_2275 0.17 -0.2 2,424,292 - Psest_2275 0.39 -1.8
Or see this region's nucleotide sequence