Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2265 and Psest_2266 are separated by 91 nucleotides Psest_2266 and Psest_2267 are separated by 50 nucleotides Psest_2267 and Psest_2268 overlap by 17 nucleotides
Psest_2265: Psest_2265 - Outer membrane protein, at 2,413,707 to 2,414,960
_2265
Psest_2266: Psest_2266 - hypothetical protein, at 2,415,052 to 2,415,396
_2266
Psest_2267: Psest_2267 - PAS domain S-box, at 2,415,447 to 2,417,144
_2267
Psest_2268: Psest_2268 - Alcohol dehydrogenase, class IV, at 2,417,128 to 2,418,291
_2268
Position (kb)
2415
2416
2417
2418 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2414.614 kb on - strand, within Psest_2265 at 2414.614 kb on - strand, within Psest_2265 at 2414.936 kb on - strand at 2414.943 kb on + strand at 2414.943 kb on + strand at 2415.158 kb on - strand, within Psest_2266 at 2415.228 kb on + strand, within Psest_2266 at 2415.228 kb on + strand, within Psest_2266 at 2415.228 kb on + strand, within Psest_2266 at 2415.229 kb on - strand, within Psest_2266 at 2415.229 kb on - strand, within Psest_2266 at 2415.229 kb on - strand, within Psest_2266 at 2415.387 kb on - strand at 2415.679 kb on + strand, within Psest_2267 at 2415.912 kb on + strand, within Psest_2267 at 2415.912 kb on + strand, within Psest_2267 at 2415.912 kb on + strand, within Psest_2267 at 2416.175 kb on + strand, within Psest_2267 at 2416.339 kb on + strand, within Psest_2267 at 2416.339 kb on + strand, within Psest_2267 at 2416.549 kb on + strand, within Psest_2267 at 2416.549 kb on + strand, within Psest_2267 at 2416.549 kb on + strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.611 kb on - strand, within Psest_2267 at 2416.611 kb on - strand, within Psest_2267 at 2416.684 kb on - strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.821 kb on - strand, within Psest_2267 at 2416.821 kb on - strand, within Psest_2267 at 2417.100 kb on + strand at 2417.100 kb on + strand at 2417.402 kb on + strand, within Psest_2268 at 2417.402 kb on + strand, within Psest_2268 at 2417.402 kb on + strand, within Psest_2268 at 2417.403 kb on - strand, within Psest_2268 at 2417.764 kb on + strand, within Psest_2268 at 2417.764 kb on + strand, within Psest_2268 at 2417.928 kb on - strand, within Psest_2268
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 2,414,614 - Psest_2265 0.72 -0.6 2,414,614 - Psest_2265 0.72 -0.1 2,414,936 - +1.1 2,414,943 + +0.7 2,414,943 + +0.7 2,415,158 - Psest_2266 0.31 +0.4 2,415,228 + Psest_2266 0.51 +0.1 2,415,228 + Psest_2266 0.51 +0.4 2,415,228 + Psest_2266 0.51 -2.2 2,415,229 - Psest_2266 0.51 -0.0 2,415,229 - Psest_2266 0.51 -0.6 2,415,229 - Psest_2266 0.51 -0.5 2,415,387 - +1.0 2,415,679 + Psest_2267 0.14 +1.9 2,415,912 + Psest_2267 0.27 +0.7 2,415,912 + Psest_2267 0.27 +1.5 2,415,912 + Psest_2267 0.27 +1.8 2,416,175 + Psest_2267 0.43 +0.5 2,416,339 + Psest_2267 0.53 +1.2 2,416,339 + Psest_2267 0.53 +1.8 2,416,549 + Psest_2267 0.65 +1.0 2,416,549 + Psest_2267 0.65 +0.6 2,416,549 + Psest_2267 0.65 -0.2 2,416,550 - Psest_2267 0.65 -1.3 2,416,550 - Psest_2267 0.65 +0.3 2,416,550 - Psest_2267 0.65 +0.2 2,416,550 - Psest_2267 0.65 +1.4 2,416,550 - Psest_2267 0.65 +0.9 2,416,611 - Psest_2267 0.69 +2.0 2,416,611 - Psest_2267 0.69 +1.4 2,416,684 - Psest_2267 0.73 +1.1 2,416,750 + Psest_2267 0.77 -1.6 2,416,750 + Psest_2267 0.77 +1.3 2,416,750 + Psest_2267 0.77 -2.2 2,416,750 + Psest_2267 0.77 +0.7 2,416,750 + Psest_2267 0.77 +2.5 2,416,750 + Psest_2267 0.77 +1.4 2,416,750 + Psest_2267 0.77 +2.2 2,416,751 - Psest_2267 0.77 +0.5 2,416,751 - Psest_2267 0.77 +1.1 2,416,751 - Psest_2267 0.77 +0.8 2,416,751 - Psest_2267 0.77 -0.0 2,416,820 + Psest_2267 0.81 +0.5 2,416,820 + Psest_2267 0.81 -0.7 2,416,820 + Psest_2267 0.81 -1.6 2,416,820 + Psest_2267 0.81 +0.8 2,416,821 - Psest_2267 0.81 -1.0 2,416,821 - Psest_2267 0.81 +1.9 2,417,100 + -0.2 2,417,100 + -1.1 2,417,402 + Psest_2268 0.24 +1.0 2,417,402 + Psest_2268 0.24 -0.1 2,417,402 + Psest_2268 0.24 +1.9 2,417,403 - Psest_2268 0.24 +0.4 2,417,764 + Psest_2268 0.55 +0.1 2,417,764 + Psest_2268 0.55 -0.6 2,417,928 - Psest_2268 0.69 +0.3
Or see this region's nucleotide sequence