Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4162

Experiment: 2-Furfuraldehyde 0.05 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.05 vol%
4,341,620	-		Psest_4160	0.42	-1.2
4,341,949	+		Psest_4160	0.87	-1.3
4,341,949	+		Psest_4160	0.87	-1.8
4,341,950	-		Psest_4160	0.87	+1.2
4,341,950	-		Psest_4160	0.87	-0.3
4,341,950	-		Psest_4160	0.87	+0.4
4,341,950	-		Psest_4160	0.87	-2.1
4,341,988	-				-0.6
4,341,988	-				+1.7
4,342,015	+				-1.2
4,342,018	+				-0.9
4,342,018	+				+0.3
4,342,019	-				+1.9
4,342,056	+				-0.4
4,342,057	-				-1.2
4,342,082	+				+1.7
4,342,083	-				+1.7
4,342,083	-				+1.2
4,342,083	-				+1.6
4,342,083	-				+0.1
4,342,083	-				-2.1
4,342,083	-				-0.2
4,342,206	+		Psest_4161	0.34	-1.2
4,342,206	+		Psest_4161	0.34	-0.8
4,342,206	+		Psest_4161	0.34	+3.2
4,342,207	-		Psest_4161	0.34	+1.9
4,342,207	-		Psest_4161	0.34	+0.9
4,342,207	-		Psest_4161	0.34	+0.3
4,342,302	+		Psest_4161	0.55	-2.9
4,342,353	+		Psest_4161	0.66	+1.9
4,342,354	-		Psest_4161	0.66	+0.3
4,342,354	-		Psest_4161	0.66	+2.2
4,342,504	+				-2.8
4,342,504	+				+0.1
4,342,504	+				+0.1
4,342,504	+				+0.6
4,342,505	-				-1.1
4,342,505	-				+1.5
4,342,505	-				-0.2
4,342,509	+				-0.0
4,342,509	+				+0.2
4,342,509	+				-2.7
4,342,509	+				-0.8
4,342,509	+				-1.8
4,342,510	-				-1.1
4,342,510	-				-1.6
4,342,510	-				-0.8
4,342,510	-				-1.1
4,342,510	-				-1.7
4,342,510	-				-1.4
4,342,523	+				+0.6
4,342,523	+				+1.7
4,342,524	-				+0.9
4,342,524	-				-1.4
4,342,524	-				-1.6
4,342,703	+		Psest_4162	0.14	+3.2
4,342,703	+		Psest_4162	0.14	+0.7
4,342,703	+		Psest_4162	0.14	+0.2
4,342,703	+		Psest_4162	0.14	-1.7
4,342,703	+		Psest_4162	0.14	+0.3
4,342,703	+		Psest_4162	0.14	-1.6
4,342,704	-		Psest_4162	0.14	+1.1
4,342,704	-		Psest_4162	0.14	+0.4
4,342,704	-		Psest_4162	0.14	+1.0
4,342,704	-		Psest_4162	0.14	+0.4
4,342,704	-		Psest_4162	0.14	+1.5
4,342,704	-		Psest_4162	0.14	-1.2
4,342,745	+		Psest_4162	0.18	+0.5
4,343,005	+		Psest_4162	0.40	+1.4
4,343,006	-		Psest_4162	0.40	+1.9
4,343,008	+		Psest_4162	0.41	+2.3
4,343,165	+		Psest_4162	0.54	-0.6
4,343,165	+		Psest_4162	0.54	-1.1
4,343,166	-		Psest_4162	0.54	+2.5
4,343,166	-		Psest_4162	0.54	+1.0
4,343,225	+		Psest_4162	0.60	-0.5
4,343,225	+		Psest_4162	0.60	-0.1
4,343,247	-		Psest_4162	0.61	+0.8
4,343,708	+				-1.0
4,343,708	+				+1.5
4,343,708	+				-0.5
4,343,708	+				+1.7
4,343,708	+				+1.8
4,343,708	+				-0.6
4,343,708	+				-0.1
4,343,708	+				+2.1
4,343,708	+				-1.2
4,343,708	+				+0.7
4,343,708	+				+1.0
4,343,709	-				-0.6
4,343,709	-				+1.2
4,343,709	-				+1.0
4,343,709	-				+0.0
4,343,709	-				+1.7
4,343,709	-				+0.9
4,343,709	-				-1.4
4,343,727	-		Psest_4163	0.13	+2.5
4,343,747	+		Psest_4163	0.19	-0.2
4,343,747	+		Psest_4163	0.19	-1.2
4,343,748	-		Psest_4163	0.19	-0.9
4,344,099	+		Psest_4164	0.28	-1.5
4,344,099	+		Psest_4164	0.28	+3.3
4,344,099	+		Psest_4164	0.28	-1.8
4,344,100	-		Psest_4164	0.29	-0.4
4,344,100	-		Psest_4164	0.29	+0.5
4,344,109	-		Psest_4164	0.31	+0.7
4,344,109	-		Psest_4164	0.31	+0.6
4,344,115	-		Psest_4164	0.32	+0.5
4,344,137	+		Psest_4164	0.38	+0.1
4,344,137	+		Psest_4164	0.38	-0.0
4,344,138	-		Psest_4164	0.38	+2.4
4,344,303	+		Psest_4164	0.80	-0.3
4,344,304	-		Psest_4164	0.80	-1.0
4,344,357	+				-1.3
4,344,357	+				+1.6
4,344,357	+				+2.0
4,344,357	+				-1.6
4,344,357	+				+0.7
4,344,358	-				+0.8
4,344,375	+				+0.3
4,344,375	+				+0.6
4,344,375	+				-0.1
4,344,375	+				+0.8
4,344,375	+				-0.3
4,344,376	-				-0.5
4,344,376	-				+0.0
4,344,458	+				+0.0
4,344,471	-				-2.5
4,344,569	+		Psest_4165	0.15	+0.5
4,344,570	-		Psest_4165	0.15	+1.3
4,344,570	-		Psest_4165	0.15	+0.1