Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3541 and Psest_3542 are separated by 22 nucleotides Psest_3542 and Psest_3543 overlap by 1 nucleotides Psest_3543 and Psest_3544 overlap by 4 nucleotides Psest_3544 and Psest_3545 are separated by 121 nucleotides
Psest_3541: Psest_3541 - Outer membrane cobalamin receptor protein, at 3,721,659 to 3,723,521
_3541
Psest_3542: Psest_3542 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 3,723,544 to 3,724,344
_3542
Psest_3543: Psest_3543 - hypothetical protein, at 3,724,344 to 3,724,751
_3543
Psest_3544: Psest_3544 - GTP cyclohydrolase II, at 3,724,748 to 3,725,365
_3544
Psest_3545: Psest_3545 - clan AA aspartic protease, TIGR02281 family, at 3,725,487 to 3,726,134
_3545
Position (kb)
3724
3725 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3723.414 kb on + strand at 3723.415 kb on - strand at 3723.415 kb on - strand at 3723.415 kb on - strand at 3723.415 kb on - strand at 3723.434 kb on + strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.459 kb on + strand at 3723.459 kb on + strand at 3723.460 kb on - strand at 3723.520 kb on - strand at 3723.843 kb on + strand, within Psest_3542 at 3723.844 kb on - strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.869 kb on + strand, within Psest_3542 at 3723.869 kb on + strand, within Psest_3542 at 3723.869 kb on + strand, within Psest_3542 at 3723.870 kb on - strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3724.276 kb on + strand at 3724.330 kb on + strand at 3724.398 kb on + strand, within Psest_3543 at 3724.399 kb on - strand, within Psest_3543 at 3724.701 kb on - strand, within Psest_3543 at 3724.701 kb on - strand, within Psest_3543 at 3724.701 kb on - strand, within Psest_3543 at 3725.401 kb on + strand at 3725.402 kb on - strand at 3725.402 kb on - strand at 3725.445 kb on + strand at 3725.446 kb on - strand at 3725.446 kb on - strand at 3725.488 kb on + strand at 3725.489 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 3,723,414 + +1.5 3,723,415 - -2.0 3,723,415 - -0.5 3,723,415 - -1.8 3,723,415 - +0.5 3,723,434 + -1.3 3,723,435 - -0.7 3,723,435 - -0.5 3,723,435 - -1.6 3,723,435 - +1.4 3,723,435 - +0.1 3,723,435 - -1.8 3,723,459 + +1.8 3,723,459 + -1.1 3,723,460 - +0.3 3,723,520 - +0.7 3,723,843 + Psest_3542 0.37 -0.6 3,723,844 - Psest_3542 0.37 -1.7 3,723,845 + Psest_3542 0.38 -1.2 3,723,845 + Psest_3542 0.38 -3.2 3,723,845 + Psest_3542 0.38 +0.7 3,723,845 + Psest_3542 0.38 +0.6 3,723,845 + Psest_3542 0.38 -0.6 3,723,846 - Psest_3542 0.38 +0.7 3,723,846 - Psest_3542 0.38 +1.0 3,723,846 - Psest_3542 0.38 -0.1 3,723,846 - Psest_3542 0.38 +0.3 3,723,846 - Psest_3542 0.38 +1.0 3,723,846 - Psest_3542 0.38 -1.0 3,723,846 - Psest_3542 0.38 +0.0 3,723,846 - Psest_3542 0.38 +0.2 3,723,846 - Psest_3542 0.38 +0.2 3,723,846 - Psest_3542 0.38 +0.2 3,723,869 + Psest_3542 0.41 -1.7 3,723,869 + Psest_3542 0.41 +0.7 3,723,869 + Psest_3542 0.41 +0.6 3,723,870 - Psest_3542 0.41 +0.5 3,723,895 + Psest_3542 0.44 -0.8 3,723,895 + Psest_3542 0.44 -1.7 3,723,895 + Psest_3542 0.44 +0.7 3,723,895 + Psest_3542 0.44 +0.1 3,723,895 + Psest_3542 0.44 +0.0 3,723,895 + Psest_3542 0.44 -1.7 3,723,896 - Psest_3542 0.44 -0.0 3,723,896 - Psest_3542 0.44 +3.4 3,723,896 - Psest_3542 0.44 +3.4 3,723,896 - Psest_3542 0.44 -1.0 3,723,896 - Psest_3542 0.44 +2.3 3,723,896 - Psest_3542 0.44 +1.8 3,723,896 - Psest_3542 0.44 +0.8 3,723,896 - Psest_3542 0.44 +0.2 3,723,896 - Psest_3542 0.44 +0.1 3,723,896 - Psest_3542 0.44 -0.6 3,723,896 - Psest_3542 0.44 +0.9 3,723,899 + Psest_3542 0.44 -0.4 3,723,899 + Psest_3542 0.44 -0.0 3,723,899 + Psest_3542 0.44 -0.1 3,723,899 + Psest_3542 0.44 +1.1 3,723,899 + Psest_3542 0.44 -0.8 3,723,899 + Psest_3542 0.44 +0.1 3,723,899 + Psest_3542 0.44 -0.6 3,723,899 + Psest_3542 0.44 +1.6 3,723,899 + Psest_3542 0.44 -1.6 3,723,899 + Psest_3542 0.44 -1.1 3,723,899 + Psest_3542 0.44 +1.3 3,723,899 + Psest_3542 0.44 -1.6 3,723,899 + Psest_3542 0.44 -0.2 3,723,899 + Psest_3542 0.44 -0.5 3,723,900 - Psest_3542 0.44 -2.0 3,723,900 - Psest_3542 0.44 +2.2 3,723,900 - Psest_3542 0.44 -2.6 3,723,900 - Psest_3542 0.44 -0.3 3,723,900 - Psest_3542 0.44 -0.2 3,723,900 - Psest_3542 0.44 -1.4 3,723,900 - Psest_3542 0.44 +0.9 3,723,900 - Psest_3542 0.44 -0.9 3,723,900 - Psest_3542 0.44 -0.6 3,723,900 - Psest_3542 0.44 -1.2 3,723,900 - Psest_3542 0.44 +0.9 3,723,900 - Psest_3542 0.44 -0.3 3,723,900 - Psest_3542 0.44 +1.2 3,723,900 - Psest_3542 0.44 -0.7 3,724,276 + +0.8 3,724,330 + -0.4 3,724,398 + Psest_3543 0.13 +0.6 3,724,399 - Psest_3543 0.13 +0.2 3,724,701 - Psest_3543 0.88 +0.9 3,724,701 - Psest_3543 0.88 +2.5 3,724,701 - Psest_3543 0.88 +1.5 3,725,401 + -0.7 3,725,402 - -2.4 3,725,402 - +1.3 3,725,445 + +0.3 3,725,446 - -1.2 3,725,446 - -0.5 3,725,488 + -1.2 3,725,489 - +0.1
Or see this region's nucleotide sequence