Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2803 and Psest_2804 overlap by 58 nucleotides Psest_2804 and Psest_2806 are separated by 533 nucleotides
Psest_2803: Psest_2803 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 2,993,964 to 2,994,884
_2803
Psest_2804: Psest_2804 - hypothetical protein, at 2,994,827 to 2,994,964
_2804
Psest_2806: Psest_2806 - RNA polymerase sigma factor RpoS, at 2,995,498 to 2,996,493
_2806
Position (kb)
2994
2995 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2993.890 kb on + strand at 2993.890 kb on + strand at 2993.890 kb on + strand at 2993.891 kb on - strand at 2993.891 kb on - strand at 2993.979 kb on + strand at 2994.024 kb on + strand at 2994.067 kb on + strand, within Psest_2803 at 2994.067 kb on + strand, within Psest_2803 at 2994.067 kb on + strand, within Psest_2803 at 2994.067 kb on + strand, within Psest_2803 at 2994.068 kb on - strand, within Psest_2803 at 2994.068 kb on - strand, within Psest_2803 at 2994.068 kb on - strand, within Psest_2803 at 2994.068 kb on - strand, within Psest_2803 at 2994.068 kb on - strand, within Psest_2803 at 2994.068 kb on - strand, within Psest_2803 at 2994.113 kb on + strand, within Psest_2803 at 2994.113 kb on + strand, within Psest_2803 at 2994.113 kb on + strand, within Psest_2803 at 2994.113 kb on + strand, within Psest_2803 at 2994.113 kb on + strand, within Psest_2803 at 2994.332 kb on + strand, within Psest_2803 at 2994.332 kb on + strand, within Psest_2803 at 2994.332 kb on + strand, within Psest_2803 at 2994.333 kb on - strand, within Psest_2803 at 2994.333 kb on - strand, within Psest_2803 at 2994.333 kb on - strand, within Psest_2803 at 2994.333 kb on - strand, within Psest_2803 at 2994.451 kb on + strand, within Psest_2803 at 2994.456 kb on - strand, within Psest_2803 at 2994.456 kb on - strand, within Psest_2803 at 2994.643 kb on + strand, within Psest_2803 at 2994.643 kb on + strand, within Psest_2803 at 2994.643 kb on + strand, within Psest_2803 at 2994.644 kb on - strand, within Psest_2803 at 2994.644 kb on - strand, within Psest_2803 at 2994.644 kb on - strand, within Psest_2803 at 2994.644 kb on - strand, within Psest_2803 at 2994.644 kb on - strand, within Psest_2803 at 2994.947 kb on - strand, within Psest_2804 at 2995.089 kb on + strand at 2995.089 kb on + strand at 2995.089 kb on + strand at 2995.089 kb on + strand at 2995.090 kb on - strand at 2995.090 kb on - strand at 2995.092 kb on - strand at 2995.236 kb on + strand at 2995.236 kb on + strand at 2995.322 kb on + strand at 2995.340 kb on + strand at 2995.340 kb on + strand at 2995.341 kb on - strand at 2995.351 kb on + strand at 2995.352 kb on - strand at 2995.352 kb on - strand at 2995.363 kb on + strand at 2995.363 kb on + strand at 2995.363 kb on + strand at 2995.493 kb on + strand at 2995.493 kb on + strand at 2995.493 kb on + strand at 2995.493 kb on + strand at 2995.493 kb on + strand at 2995.494 kb on - strand at 2995.494 kb on - strand at 2995.500 kb on - strand at 2995.500 kb on - strand at 2995.500 kb on - strand at 2995.616 kb on - strand, within Psest_2806 at 2995.720 kb on - strand, within Psest_2806
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,993,890 + -1.1 2,993,890 + +0.0 2,993,890 + -1.8 2,993,891 - -0.1 2,993,891 - -0.1 2,993,979 + +0.2 2,994,024 + +1.0 2,994,067 + Psest_2803 0.11 -1.3 2,994,067 + Psest_2803 0.11 -0.9 2,994,067 + Psest_2803 0.11 +0.2 2,994,067 + Psest_2803 0.11 -1.4 2,994,068 - Psest_2803 0.11 +0.9 2,994,068 - Psest_2803 0.11 -0.8 2,994,068 - Psest_2803 0.11 +1.9 2,994,068 - Psest_2803 0.11 -1.5 2,994,068 - Psest_2803 0.11 -1.6 2,994,068 - Psest_2803 0.11 +3.5 2,994,113 + Psest_2803 0.16 -0.3 2,994,113 + Psest_2803 0.16 +1.1 2,994,113 + Psest_2803 0.16 +1.4 2,994,113 + Psest_2803 0.16 -0.2 2,994,113 + Psest_2803 0.16 -0.1 2,994,332 + Psest_2803 0.40 -0.9 2,994,332 + Psest_2803 0.40 +2.9 2,994,332 + Psest_2803 0.40 +0.8 2,994,333 - Psest_2803 0.40 +0.5 2,994,333 - Psest_2803 0.40 -1.1 2,994,333 - Psest_2803 0.40 -1.1 2,994,333 - Psest_2803 0.40 +0.4 2,994,451 + Psest_2803 0.53 -1.6 2,994,456 - Psest_2803 0.53 +1.4 2,994,456 - Psest_2803 0.53 +1.1 2,994,643 + Psest_2803 0.74 -0.8 2,994,643 + Psest_2803 0.74 +1.7 2,994,643 + Psest_2803 0.74 +2.3 2,994,644 - Psest_2803 0.74 -2.6 2,994,644 - Psest_2803 0.74 -0.6 2,994,644 - Psest_2803 0.74 +0.7 2,994,644 - Psest_2803 0.74 -1.7 2,994,644 - Psest_2803 0.74 +1.3 2,994,947 - Psest_2804 0.87 -1.0 2,995,089 + +1.0 2,995,089 + -1.7 2,995,089 + +0.8 2,995,089 + +3.4 2,995,090 - -1.5 2,995,090 - +0.3 2,995,092 - -2.4 2,995,236 + -0.9 2,995,236 + +0.2 2,995,322 + +0.1 2,995,340 + -0.1 2,995,340 + -0.2 2,995,341 - +0.9 2,995,351 + +0.6 2,995,352 - -0.2 2,995,352 - -1.7 2,995,363 + -2.0 2,995,363 + +0.3 2,995,363 + +0.8 2,995,493 + +0.9 2,995,493 + -0.2 2,995,493 + +0.0 2,995,493 + +1.4 2,995,493 + -0.3 2,995,494 - -1.4 2,995,494 - -0.2 2,995,500 - +1.9 2,995,500 - +0.4 2,995,500 - -1.2 2,995,616 - Psest_2806 0.12 +0.8 2,995,720 - Psest_2806 0.22 -0.1
Or see this region's nucleotide sequence