Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1647 and Psest_1648 are separated by 99 nucleotides Psest_1648 and Psest_1649 are separated by 79 nucleotides
Psest_1647: Psest_1647 - Lhr-like helicases, at 1,750,168 to 1,752,759
_1647
Psest_1648: Psest_1648 - ATP-dependent DNA ligase, at 1,752,859 to 1,754,568
_1648
Psest_1649: Psest_1649 - Predicted exonuclease of the beta-lactamase fold involved in RNA processing, at 1,754,648 to 1,755,661
_1649
Position (kb)
1752
1753
1754
1755 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1751.864 kb on - strand, within Psest_1647 at 1752.465 kb on - strand, within Psest_1647 at 1752.614 kb on + strand at 1752.614 kb on + strand at 1752.614 kb on + strand at 1752.615 kb on - strand at 1752.615 kb on - strand at 1752.615 kb on - strand at 1753.063 kb on + strand, within Psest_1648 at 1753.063 kb on + strand, within Psest_1648 at 1753.063 kb on + strand, within Psest_1648 at 1753.064 kb on - strand, within Psest_1648 at 1753.178 kb on + strand, within Psest_1648 at 1753.178 kb on + strand, within Psest_1648 at 1753.187 kb on + strand, within Psest_1648 at 1753.188 kb on - strand, within Psest_1648 at 1753.188 kb on - strand, within Psest_1648 at 1753.189 kb on + strand, within Psest_1648 at 1753.189 kb on + strand, within Psest_1648 at 1753.189 kb on + strand, within Psest_1648 at 1753.190 kb on - strand, within Psest_1648 at 1753.190 kb on - strand, within Psest_1648 at 1753.190 kb on - strand, within Psest_1648 at 1753.223 kb on + strand, within Psest_1648 at 1753.223 kb on + strand, within Psest_1648 at 1753.224 kb on - strand, within Psest_1648 at 1753.224 kb on - strand, within Psest_1648 at 1753.224 kb on - strand, within Psest_1648 at 1753.224 kb on - strand, within Psest_1648 at 1753.520 kb on + strand, within Psest_1648 at 1753.520 kb on + strand, within Psest_1648 at 1753.520 kb on + strand, within Psest_1648 at 1754.342 kb on + strand, within Psest_1648 at 1754.342 kb on + strand, within Psest_1648 at 1754.490 kb on - strand at 1754.913 kb on + strand, within Psest_1649 at 1755.015 kb on + strand, within Psest_1649 at 1755.015 kb on + strand, within Psest_1649 at 1755.016 kb on - strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.033 kb on + strand, within Psest_1649 at 1755.034 kb on - strand, within Psest_1649 at 1755.034 kb on - strand, within Psest_1649 at 1755.034 kb on - strand, within Psest_1649 at 1755.034 kb on - strand, within Psest_1649 at 1755.211 kb on + strand, within Psest_1649 at 1755.215 kb on + strand, within Psest_1649 at 1755.216 kb on - strand, within Psest_1649 at 1755.216 kb on - strand, within Psest_1649 at 1755.216 kb on - strand, within Psest_1649 at 1755.240 kb on + strand, within Psest_1649 at 1755.240 kb on + strand, within Psest_1649 at 1755.240 kb on + strand, within Psest_1649 at 1755.241 kb on - strand, within Psest_1649 at 1755.330 kb on + strand, within Psest_1649 at 1755.330 kb on + strand, within Psest_1649 at 1755.331 kb on - strand, within Psest_1649 at 1755.363 kb on + strand, within Psest_1649 at 1755.363 kb on + strand, within Psest_1649 at 1755.364 kb on - strand, within Psest_1649 at 1755.450 kb on + strand, within Psest_1649 at 1755.526 kb on - strand, within Psest_1649
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 1,751,864 - Psest_1647 0.65 -0.1 1,752,465 - Psest_1647 0.89 -1.0 1,752,614 + -0.7 1,752,614 + +0.6 1,752,614 + +0.5 1,752,615 - +0.4 1,752,615 - -0.0 1,752,615 - -0.9 1,753,063 + Psest_1648 0.12 -0.7 1,753,063 + Psest_1648 0.12 -0.5 1,753,063 + Psest_1648 0.12 -0.2 1,753,064 - Psest_1648 0.12 +0.8 1,753,178 + Psest_1648 0.19 +1.5 1,753,178 + Psest_1648 0.19 +0.0 1,753,187 + Psest_1648 0.19 -0.9 1,753,188 - Psest_1648 0.19 -0.7 1,753,188 - Psest_1648 0.19 -1.1 1,753,189 + Psest_1648 0.19 +0.1 1,753,189 + Psest_1648 0.19 -2.0 1,753,189 + Psest_1648 0.19 +0.3 1,753,190 - Psest_1648 0.19 +0.1 1,753,190 - Psest_1648 0.19 -0.6 1,753,190 - Psest_1648 0.19 -2.1 1,753,223 + Psest_1648 0.21 +1.3 1,753,223 + Psest_1648 0.21 +1.1 1,753,224 - Psest_1648 0.21 -3.1 1,753,224 - Psest_1648 0.21 +1.8 1,753,224 - Psest_1648 0.21 +1.1 1,753,224 - Psest_1648 0.21 +0.6 1,753,520 + Psest_1648 0.39 +1.1 1,753,520 + Psest_1648 0.39 -0.4 1,753,520 + Psest_1648 0.39 +2.2 1,754,342 + Psest_1648 0.87 +0.5 1,754,342 + Psest_1648 0.87 -2.2 1,754,490 - -1.0 1,754,913 + Psest_1649 0.26 +0.6 1,755,015 + Psest_1649 0.36 -0.3 1,755,015 + Psest_1649 0.36 -1.5 1,755,016 - Psest_1649 0.36 -1.2 1,755,033 + Psest_1649 0.38 -0.4 1,755,033 + Psest_1649 0.38 +1.3 1,755,033 + Psest_1649 0.38 -1.0 1,755,033 + Psest_1649 0.38 -1.0 1,755,033 + Psest_1649 0.38 +0.5 1,755,033 + Psest_1649 0.38 -3.3 1,755,033 + Psest_1649 0.38 +1.0 1,755,033 + Psest_1649 0.38 -0.0 1,755,033 + Psest_1649 0.38 +1.2 1,755,034 - Psest_1649 0.38 -1.0 1,755,034 - Psest_1649 0.38 +1.4 1,755,034 - Psest_1649 0.38 +0.6 1,755,034 - Psest_1649 0.38 +0.5 1,755,211 + Psest_1649 0.56 +0.8 1,755,215 + Psest_1649 0.56 -1.0 1,755,216 - Psest_1649 0.56 +0.4 1,755,216 - Psest_1649 0.56 +0.8 1,755,216 - Psest_1649 0.56 -1.4 1,755,240 + Psest_1649 0.58 +0.3 1,755,240 + Psest_1649 0.58 +0.4 1,755,240 + Psest_1649 0.58 +1.5 1,755,241 - Psest_1649 0.58 -0.7 1,755,330 + Psest_1649 0.67 -0.3 1,755,330 + Psest_1649 0.67 +0.2 1,755,331 - Psest_1649 0.67 +1.1 1,755,363 + Psest_1649 0.71 -1.8 1,755,363 + Psest_1649 0.71 +0.0 1,755,364 - Psest_1649 0.71 +0.6 1,755,450 + Psest_1649 0.79 -0.5 1,755,526 - Psest_1649 0.87 -2.8
Or see this region's nucleotide sequence