Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1352 and Psest_1353 are separated by 144 nucleotides Psest_1353 and Psest_1354 are separated by 16 nucleotides Psest_1354 and Psest_1355 are separated by 119 nucleotides Psest_1355 and Psest_1356 are separated by 1 nucleotides
Psest_1352: Psest_1352 - Predicted membrane protein, at 1,463,759 to 1,464,922
_1352
Psest_1353: Psest_1353 - Uncharacterized protein conserved in bacteria, at 1,465,067 to 1,465,486
_1353
Psest_1354: Psest_1354 - Uncharacterized protein conserved in bacteria, at 1,465,503 to 1,465,922
_1354
Psest_1355: Psest_1355 - Predicted protease of the Abi (CAAX) family, at 1,466,042 to 1,466,791
_1355
Psest_1356: Psest_1356 - Predicted periplasmic protein, at 1,466,793 to 1,467,347
_1356
Position (kb)
1465
1466 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.552 kb on + strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.553 kb on - strand, within Psest_1352 at 1464.802 kb on + strand, within Psest_1352 at 1464.803 kb on - strand, within Psest_1352 at 1464.993 kb on + strand at 1465.288 kb on + strand, within Psest_1353 at 1465.350 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.427 kb on - strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.435 kb on + strand, within Psest_1353 at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.471 kb on - strand at 1465.471 kb on - strand at 1465.471 kb on - strand at 1465.806 kb on + strand, within Psest_1354 at 1465.807 kb on - strand, within Psest_1354 at 1465.956 kb on - strand at 1465.966 kb on - strand at 1466.041 kb on - strand at 1466.055 kb on + strand at 1466.905 kb on + strand, within Psest_1356 at 1466.905 kb on + strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 1,464,552 + Psest_1352 0.68 -0.2 1,464,552 + Psest_1352 0.68 +1.1 1,464,552 + Psest_1352 0.68 +0.8 1,464,552 + Psest_1352 0.68 +1.5 1,464,552 + Psest_1352 0.68 +1.0 1,464,552 + Psest_1352 0.68 -1.1 1,464,552 + Psest_1352 0.68 +0.6 1,464,552 + Psest_1352 0.68 -1.6 1,464,552 + Psest_1352 0.68 -0.2 1,464,553 - Psest_1352 0.68 +0.6 1,464,553 - Psest_1352 0.68 -0.9 1,464,553 - Psest_1352 0.68 +1.0 1,464,553 - Psest_1352 0.68 -0.5 1,464,553 - Psest_1352 0.68 +0.2 1,464,553 - Psest_1352 0.68 -1.5 1,464,802 + Psest_1352 0.90 +1.3 1,464,803 - Psest_1352 0.90 -1.8 1,464,993 + +0.2 1,465,288 + Psest_1353 0.53 +1.1 1,465,350 + Psest_1353 0.67 +2.6 1,465,426 + Psest_1353 0.85 +2.4 1,465,426 + Psest_1353 0.85 +2.8 1,465,426 + Psest_1353 0.85 +1.2 1,465,426 + Psest_1353 0.85 +0.9 1,465,426 + Psest_1353 0.85 +1.4 1,465,426 + Psest_1353 0.85 +3.0 1,465,427 - Psest_1353 0.86 -0.5 1,465,428 + Psest_1353 0.86 +0.2 1,465,428 + Psest_1353 0.86 -0.6 1,465,428 + Psest_1353 0.86 -0.4 1,465,429 - Psest_1353 0.86 -1.0 1,465,429 - Psest_1353 0.86 +0.0 1,465,429 - Psest_1353 0.86 -1.5 1,465,429 - Psest_1353 0.86 +0.6 1,465,435 + Psest_1353 0.88 +0.1 1,465,470 + -1.1 1,465,470 + +1.2 1,465,470 + +0.8 1,465,470 + -1.2 1,465,470 + +0.6 1,465,470 + -0.3 1,465,470 + -0.8 1,465,471 - -1.6 1,465,471 - +0.4 1,465,471 - +0.2 1,465,806 + Psest_1354 0.72 +1.9 1,465,807 - Psest_1354 0.72 +3.3 1,465,956 - +0.2 1,465,966 - -1.7 1,466,041 - -0.0 1,466,055 + +0.8 1,466,905 + Psest_1356 0.20 -1.7 1,466,905 + Psest_1356 0.20 +1.5 1,466,906 - Psest_1356 0.20 +1.0 1,466,906 - Psest_1356 0.20 +0.3 1,466,906 - Psest_1356 0.20 +0.1 1,466,906 - Psest_1356 0.20 +0.9
Or see this region's nucleotide sequence