Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1276

Experiment: 2-Furfuraldehyde 0.05 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.05 vol%
1,378,185	+				-0.9
1,378,197	+				-1.6
1,378,212	-				+0.5
1,378,212	-				-0.2
1,378,212	-				+1.6
1,378,226	+				+0.6
1,378,564	+		Psest_1275	0.39	-1.2
1,378,565	-		Psest_1275	0.39	-0.5
1,378,622	-		Psest_1275	0.45	-1.4
1,378,622	-		Psest_1275	0.45	-3.0
1,378,622	-		Psest_1275	0.45	+1.7
1,378,622	-		Psest_1275	0.45	-2.0
1,378,712	+		Psest_1275	0.56	-2.1
1,378,864	+		Psest_1275	0.74	-1.2
1,378,864	+		Psest_1275	0.74	+1.1
1,378,864	+		Psest_1275	0.74	-0.1
1,378,864	+		Psest_1275	0.74	-0.5
1,378,864	+		Psest_1275	0.74	+1.2
1,378,864	+		Psest_1275	0.74	-1.2
1,378,865	-		Psest_1275	0.74	-0.3
1,378,865	-		Psest_1275	0.74	-2.1
1,378,865	-		Psest_1275	0.74	-0.7
1,378,865	-		Psest_1275	0.74	+0.7
1,378,865	-		Psest_1275	0.74	+2.0
1,378,865	-		Psest_1275	0.74	+0.1
1,378,865	-		Psest_1275	0.74	-0.6
1,378,865	-		Psest_1275	0.74	-0.7
1,378,865	-		Psest_1275	0.74	-0.8
1,378,876	+		Psest_1275	0.75	-0.0
1,378,876	+		Psest_1275	0.75	-0.4
1,378,876	+		Psest_1275	0.75	-0.0
1,378,876	+		Psest_1275	0.75	-0.7
1,378,876	+		Psest_1275	0.75	-0.3
1,378,876	+		Psest_1275	0.75	-0.8
1,378,876	+		Psest_1275	0.75	+0.3
1,378,877	-		Psest_1275	0.75	-0.9
1,378,877	-		Psest_1275	0.75	-1.5
1,378,877	-		Psest_1275	0.75	+0.6
1,378,877	-		Psest_1275	0.75	-1.3
1,378,877	-		Psest_1275	0.75	+1.5
1,378,923	-		Psest_1275	0.80	-1.1
1,378,923	-		Psest_1275	0.80	+0.2
1,379,005	+				+0.0
1,379,005	+				-1.0
1,379,005	+				+1.0
1,379,005	+				-1.7
1,379,005	+				-0.7
1,379,006	-				+0.1
1,379,006	-				-0.7
1,379,006	-				-0.7
1,379,006	-				-0.5
1,379,006	-				-0.3
1,379,006	-				-0.8
1,379,006	-				+0.4
1,379,006	-				-0.4
1,379,105	+				-1.7
1,379,221	-				+0.6
1,379,221	-				+0.1
1,379,742	+		Psest_1276	0.53	+1.0
1,379,743	-		Psest_1276	0.53	+1.8
1,379,743	-		Psest_1276	0.53	+0.1
1,379,814	+		Psest_1276	0.60	+1.1
1,379,814	+		Psest_1276	0.60	+1.1
1,379,815	-		Psest_1276	0.60	-0.3
1,379,815	-		Psest_1276	0.60	+0.5
1,379,815	-		Psest_1276	0.60	+0.6
1,379,889	+		Psest_1276	0.67	-0.8
1,379,889	+		Psest_1276	0.67	+1.2
1,379,889	+		Psest_1276	0.67	-0.7
1,379,889	+		Psest_1276	0.67	+1.6
1,379,889	+		Psest_1276	0.67	+2.5
1,379,889	+		Psest_1276	0.67	+0.9
1,379,889	+		Psest_1276	0.67	+1.6
1,379,890	-		Psest_1276	0.67	+2.4
1,379,890	-		Psest_1276	0.67	+2.7
1,380,067	-		Psest_1276	0.84	-0.4
1,380,159	-				+0.6
1,380,159	-				+0.7
1,380,278	-				-0.1
1,380,471	+				+1.5
1,380,658	-				-1.3
1,380,659	+				-1.7
1,380,659	+				+0.5
1,380,659	+				-0.3
1,380,659	+				+2.0
1,380,659	+				+2.1
1,380,659	+				-2.1
1,380,659	+				+0.8
1,380,659	+				+0.9
1,380,659	+				-1.4
1,380,660	-				-0.7
1,380,660	-				+1.3
1,380,660	-				+0.1
1,380,660	-				-2.9
1,380,660	-				-0.2
1,380,864	+		Psest_1277	0.20	-0.1
1,380,864	+		Psest_1277	0.20	+2.3
1,380,865	-		Psest_1277	0.20	-0.7
1,380,865	-		Psest_1277	0.20	-0.1
1,380,865	-		Psest_1277	0.20	-0.1
1,380,867	-		Psest_1277	0.21	-1.0
1,380,867	-		Psest_1277	0.21	+0.4
1,380,887	+		Psest_1277	0.22	-0.6
1,380,887	+		Psest_1277	0.22	-0.8
1,380,888	-		Psest_1277	0.22	+2.2
1,380,908	+		Psest_1277	0.23	+1.3
1,380,908	+		Psest_1277	0.23	+0.1
1,380,908	+		Psest_1277	0.23	+0.4
1,380,909	-		Psest_1277	0.23	+0.9
1,380,909	-		Psest_1277	0.23	+0.0
1,381,007	+		Psest_1277	0.29	-1.2
1,381,077	-		Psest_1277	0.33	+1.6
1,381,077	-		Psest_1277	0.33	+0.9
1,381,112	+		Psest_1277	0.35	-0.9
1,381,214	+		Psest_1277	0.41	-1.4
1,381,214	+		Psest_1277	0.41	-1.4
1,381,215	-		Psest_1277	0.41	+3.0
1,381,215	-		Psest_1277	0.41	-1.0