Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4278

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,468,236	+				+3.5
4,468,236	+				+0.4
4,468,236	+				-1.2
4,468,236	+				+1.3
4,468,236	+				+0.2
4,468,237	-				-0.4
4,468,237	-				+2.2
4,468,374	-		Psest_4277	0.15	+1.9
4,468,394	-		Psest_4277	0.17	+0.0
4,468,492	+		Psest_4277	0.29	-2.0
4,468,492	+		Psest_4277	0.29	+0.2
4,468,492	+		Psest_4277	0.29	+0.9
4,468,492	+		Psest_4277	0.29	+1.0
4,468,492	+		Psest_4277	0.29	+2.9
4,468,493	-		Psest_4277	0.30	-2.4
4,468,493	-		Psest_4277	0.30	-0.2
4,468,493	-		Psest_4277	0.30	-0.3
4,468,493	-		Psest_4277	0.30	-1.2
4,468,790	+		Psest_4277	0.67	+0.9
4,468,791	-		Psest_4277	0.67	+1.0
4,468,791	-		Psest_4277	0.67	+0.1
4,468,791	-		Psest_4277	0.67	-1.7
4,468,791	-		Psest_4277	0.67	+1.2
4,468,791	-		Psest_4277	0.67	+1.0
4,468,791	-		Psest_4277	0.67	-1.6
4,468,811	+		Psest_4277	0.70	-2.1
4,468,811	+		Psest_4277	0.70	-1.1
4,468,812	-		Psest_4277	0.70	-1.9
4,468,991	+				-0.1
4,468,991	+				+0.4
4,468,991	+				-0.2
4,468,992	-				+1.1
4,468,992	-				+0.5
4,469,536	+		Psest_4278	0.59	-1.4
4,469,707	-		Psest_4278	0.80	-1.6
4,469,716	+		Psest_4278	0.81	-1.2
4,469,716	+		Psest_4278	0.81	-1.1
4,469,717	-		Psest_4278	0.81	-0.1
4,469,878	+				-3.1
4,469,911	+				+3.9
4,469,911	+				-0.3
4,469,911	+				-2.9
4,469,912	-				-0.0
4,469,945	-				-2.0
4,470,110	+		Psest_4279	0.19	-0.1
4,470,111	-		Psest_4279	0.20	+2.0
4,470,139	+		Psest_4279	0.22	+2.6
4,470,139	+		Psest_4279	0.22	-0.0
4,470,139	+		Psest_4279	0.22	-2.5
4,470,139	+		Psest_4279	0.22	+0.6
4,470,140	-		Psest_4279	0.22	+0.1
4,470,140	-		Psest_4279	0.22	-0.3
4,470,140	-		Psest_4279	0.22	+2.4
4,470,140	-		Psest_4279	0.22	+0.2
4,470,140	-		Psest_4279	0.22	-0.3
4,470,140	-		Psest_4279	0.22	-1.2
4,470,140	-		Psest_4279	0.22	-0.1
4,470,140	-		Psest_4279	0.22	+2.6
4,470,166	+		Psest_4279	0.24	+1.3
4,470,274	+		Psest_4279	0.33	+0.3
4,470,513	+		Psest_4279	0.52	+1.1
4,470,702	+		Psest_4279	0.67	+0.1
4,470,703	-		Psest_4279	0.67	-0.9
4,470,703	-		Psest_4279	0.67	+1.5
4,470,712	-		Psest_4279	0.67	-0.3
4,470,865	-		Psest_4279	0.80	-1.5