Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4241

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,423,660	+		Psest_4239	0.65	-0.1
4,423,660	+		Psest_4239	0.65	-0.3
4,423,660	+		Psest_4239	0.65	-0.1
4,423,660	+		Psest_4239	0.65	-1.5
4,423,660	+		Psest_4239	0.65	+0.7
4,423,661	-		Psest_4239	0.65	-2.7
4,423,661	-		Psest_4239	0.65	-0.2
4,423,661	-		Psest_4239	0.65	-0.0
4,423,661	-		Psest_4239	0.65	-1.8
4,423,661	-		Psest_4239	0.65	+1.0
4,423,661	-		Psest_4239	0.65	+1.5
4,423,661	-		Psest_4239	0.65	-0.5
4,423,661	-		Psest_4239	0.65	-0.9
4,423,664	+		Psest_4239	0.66	+0.8
4,423,664	+		Psest_4239	0.66	+1.0
4,423,664	+		Psest_4239	0.66	+2.3
4,423,664	+		Psest_4239	0.66	-1.9
4,423,664	+		Psest_4239	0.66	+0.2
4,423,665	-		Psest_4239	0.66	+0.3
4,423,665	-		Psest_4239	0.66	-0.7
4,423,665	-		Psest_4239	0.66	+0.1
4,423,665	-		Psest_4239	0.66	+2.2
4,423,665	-		Psest_4239	0.66	-0.1
4,423,665	-		Psest_4239	0.66	+0.4
4,423,665	-		Psest_4239	0.66	+0.5
4,424,051	+				+0.5
4,424,051	+				+0.3
4,424,051	+				+1.3
4,424,051	+				-1.4
4,424,051	+				+2.0
4,424,051	+				-2.0
4,424,051	+				-1.4
4,424,051	+				+0.1
4,424,051	+				-1.9
4,424,051	+				-0.7
4,424,051	+				+0.4
4,424,147	+				+0.1
4,424,147	+				+0.9
4,424,147	+				-0.5
4,424,147	+				-2.3
4,424,147	+				+1.1
4,424,147	+				+1.1
4,424,148	-				-0.7
4,424,148	-				+2.6
4,424,148	-				-1.1
4,424,148	-				-0.5
4,424,148	-				-1.3
4,424,148	-				-0.8
4,424,148	-				-1.9
4,424,148	-				-0.0
4,424,148	-				-0.1
4,424,148	-				+0.5
4,424,148	-				-1.3
4,424,148	-				-1.1
4,424,148	-				-0.7
4,424,149	+				+0.4
4,424,149	+				-0.1
4,424,149	+				-0.2
4,424,149	+				+0.2
4,424,149	+				-0.8
4,424,149	+				+2.8
4,424,149	+				+1.8
4,424,149	+				-0.1
4,424,149	+				-1.7
4,424,149	+				+1.6
4,424,149	+				+0.1
4,424,149	+				+0.2
4,424,149	+				+0.1
4,424,149	+				-0.4
4,424,149	+				+0.4
4,424,149	+				-0.1
4,424,149	+				+0.7
4,424,149	+				+0.7
4,424,149	+				-1.0
4,424,149	+				+2.2
4,424,149	+				+0.3
4,424,149	+				+1.7
4,424,149	+				+1.6
4,424,149	+				+0.6
4,424,149	+				+0.2
4,424,149	+				-0.3
4,424,149	+				-0.6
4,424,149	+				-0.6
4,424,149	+				+0.1
4,424,149	+				-2.2
4,424,149	+				-2.1
4,424,149	+				+0.6
4,424,149	+				+0.6
4,424,149	+				+1.5
4,424,149	+				-0.4
4,424,149	+				-0.6
4,424,149	+				-0.0
4,424,149	+				-1.7
4,424,149	+				-0.6
4,424,149	+				+0.9
4,424,149	+				-0.7
4,424,149	+				-0.7
4,424,149	+				+0.5
4,424,149	+				+0.9
4,424,149	+				+1.3
4,424,149	+				-1.8
4,424,149	+				-1.1
4,424,149	+				+0.1
4,424,149	+				-1.0
4,424,149	+				-0.3
4,424,149	+				-2.3
4,424,149	+				+1.0
4,424,149	+				+0.1
4,424,149	+				-2.7
4,424,149	+				-0.0
4,424,149	+				+1.2
4,424,150	-				-0.7
4,424,150	-				+0.0
4,424,150	-				-1.3
4,424,150	-				-0.3
4,424,150	-				-2.7
4,424,150	-				-2.3
4,424,150	-				+0.1
4,424,150	-				+2.0
4,424,150	-				+0.3
4,424,150	-				-0.6
4,424,150	-				+1.4
4,424,150	-				+2.0
4,424,150	-				+0.6
4,424,150	-				+2.4
4,424,150	-				-1.5
4,424,150	-				-1.8
4,424,150	-				-0.0
4,424,150	-				+0.2
4,424,150	-				-0.5
4,424,150	-				-1.3
4,424,150	-				+1.1
4,424,150	-				-0.4
4,424,150	-				+0.7
4,424,150	-				+0.2
4,424,150	-				-0.9
4,424,150	-				+0.5
4,424,150	-				+0.2
4,424,150	-				-1.1
4,424,150	-				+0.9
4,424,150	-				-0.0
4,424,150	-				-0.2
4,424,150	-				+1.2
4,424,150	-				+1.4
4,424,150	-				+1.0
4,424,150	-				+3.2
4,424,150	-				-1.3
4,424,150	-				-0.9
4,424,150	-				-0.4
4,424,150	-				+2.5
4,424,150	-				-0.6
4,424,150	-				-2.1
4,424,150	-				+0.7
4,424,150	-				+0.5
4,424,150	-				+0.3
4,424,150	-				-1.4
4,424,150	-				-0.3
4,424,150	-				-2.0
4,424,150	-				+0.7
4,424,150	-				+2.0
4,424,150	-				-1.9
4,424,150	-				+0.4
4,424,150	-				-1.1
4,424,150	-				-0.1
4,424,150	-				-0.7
4,424,150	-				+0.7
4,424,151	+				-0.1
4,424,151	+				-1.4
4,424,151	+				+0.2
4,424,151	+				-1.9
4,424,151	+				-2.5
4,424,151	+				-0.1
4,424,151	+				-0.6
4,424,151	+				+2.3
4,424,151	+				+0.4
4,424,151	+				-0.7
4,424,152	-				-0.5
4,424,152	-				+1.3
4,424,152	-				-2.6
4,424,152	-				-2.3
4,424,152	-				+0.4
4,424,327	+				+1.9
4,424,327	+				+1.8
4,424,328	-				-1.0
4,424,328	-				+0.2
4,424,469	+		Psest_4241	0.11	-2.2
4,424,469	+		Psest_4241	0.11	-0.0
4,424,469	+		Psest_4241	0.11	-0.8
4,424,469	+		Psest_4241	0.11	-1.8
4,424,470	-		Psest_4241	0.12	-0.4
4,424,523	+		Psest_4241	0.51	-1.6
4,424,523	+		Psest_4241	0.51	-1.2
4,424,524	-		Psest_4241	0.52	-2.6
4,424,524	-		Psest_4241	0.52	-0.4
4,424,544	+		Psest_4241	0.67	-0.8
4,424,586	+				-3.2
4,424,888	+		Psest_4242	0.23	+2.1
4,425,047	+		Psest_4242	0.37	-1.2
4,425,047	+		Psest_4242	0.37	-2.0
4,425,047	+		Psest_4242	0.37	+0.0
4,425,047	+		Psest_4242	0.37	-1.0
4,425,047	+		Psest_4242	0.37	-0.6
4,425,047	+		Psest_4242	0.37	-0.8
4,425,047	+		Psest_4242	0.37	+0.1
4,425,048	-		Psest_4242	0.37	-0.9
4,425,048	-		Psest_4242	0.37	-1.3
4,425,048	-		Psest_4242	0.37	+0.7
4,425,048	-		Psest_4242	0.37	-0.8
4,425,048	-		Psest_4242	0.37	+0.7
4,425,048	-		Psest_4242	0.37	-1.2
4,425,048	-		Psest_4242	0.37	+1.4
4,425,048	-		Psest_4242	0.37	-2.6
4,425,048	-		Psest_4242	0.37	-0.9
4,425,048	-		Psest_4242	0.37	+0.5
4,425,113	+		Psest_4242	0.42	-1.0
4,425,113	+		Psest_4242	0.42	+1.1
4,425,114	-		Psest_4242	0.42	+1.3
4,425,114	-		Psest_4242	0.42	-1.7
4,425,263	-		Psest_4242	0.55	+0.1