Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4128

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,305,689	+		Psest_4127	0.27	-0.6
4,305,695	+		Psest_4127	0.28	-0.4
4,305,747	-		Psest_4127	0.32	-0.1
4,305,747	-		Psest_4127	0.32	-2.1
4,305,747	-		Psest_4127	0.32	-0.4
4,305,759	-		Psest_4127	0.33	-1.3
4,305,759	-		Psest_4127	0.33	-1.7
4,306,103	+		Psest_4127	0.62	-1.7
4,306,103	+		Psest_4127	0.62	-0.5
4,306,104	-		Psest_4127	0.62	+2.1
4,306,104	-		Psest_4127	0.62	+2.1
4,306,223	+		Psest_4127	0.72	+0.6
4,306,224	-		Psest_4127	0.72	+1.3
4,306,227	+		Psest_4127	0.73	+0.2
4,306,227	+		Psest_4127	0.73	+0.6
4,306,227	+		Psest_4127	0.73	-0.1
4,306,228	-		Psest_4127	0.73	-0.8
4,306,325	+		Psest_4127	0.81	-0.4
4,306,325	+		Psest_4127	0.81	-2.2
4,306,424	+		Psest_4127	0.89	-0.8
4,306,425	-		Psest_4127	0.89	-1.3
4,306,542	-				-0.6
4,306,543	+				-1.9
4,306,543	+				-0.8
4,306,543	+				-0.7
4,306,543	+				+0.5
4,306,543	+				+0.5
4,306,543	+				-2.6
4,306,543	+				+0.8
4,306,543	+				-0.2
4,306,543	+				+1.9
4,306,543	+				+0.0
4,306,543	+				+0.9
4,306,543	+				+0.8
4,306,543	+				-2.1
4,306,543	+				+0.1
4,306,544	-				-1.0
4,306,544	-				-0.8
4,306,544	-				+0.2
4,306,544	-				-0.4
4,306,544	-				-1.8
4,306,544	-				-0.8
4,306,682	+		Psest_4128	0.11	-0.9
4,306,683	-		Psest_4128	0.11	-1.6
4,306,725	-		Psest_4128	0.16	+0.5
4,307,316	-		Psest_4128	0.85	-1.1
4,307,432	-				-2.7
4,307,432	-				+1.2
4,307,712	+		Psest_4129	0.17	-0.7
4,307,712	+		Psest_4129	0.17	+0.9
4,307,712	+		Psest_4129	0.17	+1.6
4,307,712	+		Psest_4129	0.17	-0.4
4,307,712	+		Psest_4129	0.17	+0.1
4,307,712	+		Psest_4129	0.17	+1.0
4,307,712	+		Psest_4129	0.17	-0.1
4,307,731	+		Psest_4129	0.18	-1.5
4,307,731	+		Psest_4129	0.18	-1.3
4,307,731	+		Psest_4129	0.18	+0.4
4,307,731	+		Psest_4129	0.18	-1.6
4,307,731	+		Psest_4129	0.18	+1.2
4,307,731	+		Psest_4129	0.18	-1.4
4,307,731	+		Psest_4129	0.18	-0.5
4,307,731	+		Psest_4129	0.18	-0.7
4,307,731	+		Psest_4129	0.18	-1.6
4,307,731	+		Psest_4129	0.18	+0.7
4,307,731	+		Psest_4129	0.18	-1.2
4,307,732	-		Psest_4129	0.18	+0.4
4,307,732	-		Psest_4129	0.18	-0.8
4,307,732	-		Psest_4129	0.18	+4.3
4,307,732	-		Psest_4129	0.18	-1.1
4,307,732	-		Psest_4129	0.18	+0.8
4,307,732	-		Psest_4129	0.18	+0.8
4,307,732	-		Psest_4129	0.18	-2.2
4,307,732	-		Psest_4129	0.18	-1.0
4,307,758	-		Psest_4129	0.20	-0.6
4,307,758	-		Psest_4129	0.20	-1.0
4,307,779	+		Psest_4129	0.22	+1.1
4,307,840	-		Psest_4129	0.26	-0.4
4,307,840	-		Psest_4129	0.26	+0.7
4,308,027	+		Psest_4129	0.38	+1.5
4,308,028	-		Psest_4129	0.38	-2.3
4,308,028	-		Psest_4129	0.38	-0.4
4,308,388	+		Psest_4129	0.63	-0.6
4,308,389	-		Psest_4129	0.63	-1.7