Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4127

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,304,386	+				-1.0
4,304,444	+		Psest_4125	0.13	-1.5
4,304,444	+		Psest_4125	0.13	+1.5
4,304,444	+		Psest_4125	0.13	-1.5
4,304,445	-		Psest_4125	0.13	+0.9
4,304,445	-		Psest_4125	0.13	+1.7
4,304,445	-		Psest_4125	0.13	-0.3
4,304,445	-		Psest_4125	0.13	-1.2
4,304,715	+		Psest_4125	0.71	-2.0
4,304,715	+		Psest_4125	0.71	+0.9
4,304,716	-		Psest_4125	0.71	+0.6
4,304,716	-		Psest_4125	0.71	+0.0
4,304,726	-		Psest_4125	0.73	-1.1
4,304,772	+		Psest_4125	0.83	-0.3
4,304,772	+		Psest_4125	0.83	+1.2
4,304,772	+		Psest_4125	0.83	-0.6
4,304,772	+		Psest_4125	0.83	-0.2
4,304,772	+		Psest_4125	0.83	-0.1
4,304,772	+		Psest_4125	0.83	-3.5
4,304,772	+		Psest_4125	0.83	-2.3
4,304,772	+		Psest_4125	0.83	-0.9
4,304,772	+		Psest_4125	0.83	+0.7
4,304,772	+		Psest_4125	0.83	-1.5
4,304,772	+		Psest_4125	0.83	-1.0
4,304,772	+		Psest_4125	0.83	-0.6
4,304,773	-		Psest_4125	0.83	-0.7
4,304,773	-		Psest_4125	0.83	+0.1
4,304,773	-		Psest_4125	0.83	-1.8
4,304,773	-		Psest_4125	0.83	-1.0
4,304,773	-		Psest_4125	0.83	-0.6
4,304,773	-		Psest_4125	0.83	-1.5
4,304,849	+				+0.8
4,305,101	+		Psest_4126	0.68	+1.0
4,305,102	-		Psest_4126	0.68	+2.0
4,305,221	-				+0.2
4,305,221	-				-0.8
4,305,247	+				+1.1
4,305,247	+				-1.9
4,305,247	+				+0.9
4,305,248	-				+1.8
4,305,248	-				+0.5
4,305,257	+				+0.9
4,305,258	-				-0.6
4,305,258	-				-1.0
4,305,258	-				+1.9
4,305,258	-				-0.6
4,305,258	-				-1.4
4,305,258	-				+0.4
4,305,295	+				+0.3
4,305,295	+				+1.6
4,305,295	+				+0.1
4,305,296	-				+0.4
4,305,296	-				-0.8
4,305,306	+				+0.1
4,305,307	-				-1.6
4,305,312	-				+0.6
4,305,312	-				+2.7
4,305,312	-				+1.8
4,305,321	+				-0.4
4,305,321	+				-1.0
4,305,352	+				+0.3
4,305,352	+				-0.2
4,305,353	-				-2.5
4,305,353	-				+2.5
4,305,384	+				+1.0
4,305,689	+		Psest_4127	0.27	-0.6
4,305,695	+		Psest_4127	0.28	-0.4
4,305,747	-		Psest_4127	0.32	-0.1
4,305,747	-		Psest_4127	0.32	-2.1
4,305,747	-		Psest_4127	0.32	-0.4
4,305,759	-		Psest_4127	0.33	-1.3
4,305,759	-		Psest_4127	0.33	-1.7
4,306,103	+		Psest_4127	0.62	-1.7
4,306,103	+		Psest_4127	0.62	-0.5
4,306,104	-		Psest_4127	0.62	+2.1
4,306,104	-		Psest_4127	0.62	+2.1
4,306,223	+		Psest_4127	0.72	+0.6
4,306,224	-		Psest_4127	0.72	+1.3
4,306,227	+		Psest_4127	0.73	+0.2
4,306,227	+		Psest_4127	0.73	+0.6
4,306,227	+		Psest_4127	0.73	-0.1
4,306,228	-		Psest_4127	0.73	-0.8
4,306,325	+		Psest_4127	0.81	-0.4
4,306,325	+		Psest_4127	0.81	-2.2
4,306,424	+		Psest_4127	0.89	-0.8
4,306,425	-		Psest_4127	0.89	-1.3
4,306,542	-				-0.6
4,306,543	+				-1.9
4,306,543	+				-0.8
4,306,543	+				-0.7
4,306,543	+				+0.5
4,306,543	+				+0.5
4,306,543	+				-2.6
4,306,543	+				+0.8
4,306,543	+				-0.2
4,306,543	+				+1.9
4,306,543	+				+0.0
4,306,543	+				+0.9
4,306,543	+				+0.8
4,306,543	+				-2.1
4,306,543	+				+0.1
4,306,544	-				-1.0
4,306,544	-				-0.8
4,306,544	-				+0.2
4,306,544	-				-0.4
4,306,544	-				-1.8
4,306,544	-				-0.8
4,306,682	+		Psest_4128	0.11	-0.9
4,306,683	-		Psest_4128	0.11	-1.6
4,306,725	-		Psest_4128	0.16	+0.5
4,307,316	-		Psest_4128	0.85	-1.1
4,307,432	-				-2.7
4,307,432	-				+1.2