Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3447

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,618,038	+				+1.7
3,618,038	+				+2.3
3,618,039	-				-0.6
3,618,095	+				-0.0
3,618,096	-				-0.5
3,618,253	-		Psest_3446	0.28	+0.1
3,618,607	+				-0.1
3,618,607	+				-2.2
3,618,608	-				+0.4
3,618,671	+				-2.7
3,618,797	+				+0.7
3,619,000	+		Psest_3447	0.31	+0.0
3,619,069	+		Psest_3447	0.42	-1.2
3,619,501	-		Psest_3448	0.10	-0.8
3,619,501	-				+1.2
3,619,625	+		Psest_3448	0.23	+1.8
3,619,625	+		Psest_3448	0.23	+0.1
3,619,625	+		Psest_3448	0.23	-0.3
3,619,625	+		Psest_3448	0.23	+2.5
3,619,625	+		Psest_3448	0.23	+1.5
3,619,625	+		Psest_3448	0.23	-0.1
3,619,626	-		Psest_3448	0.23	+0.9
3,619,626	-		Psest_3448	0.23	-0.0
3,619,790	+		Psest_3448	0.40	-0.2
3,619,791	-		Psest_3448	0.40	-0.3
3,619,817	-		Psest_3448	0.43	+0.1
3,619,854	-		Psest_3448	0.46	+0.9
3,619,920	+		Psest_3448	0.53	-0.3
3,619,969	+		Psest_3448	0.58	+1.6
3,619,969	+		Psest_3448	0.58	-0.5
3,619,969	+		Psest_3448	0.58	+0.8
3,619,970	-		Psest_3448	0.58	-0.4
3,619,970	-		Psest_3448	0.58	+4.5
3,619,970	-		Psest_3448	0.58	+0.9
3,619,970	-		Psest_3448	0.58	-3.8
3,619,970	-		Psest_3448	0.58	+0.7
3,620,135	+		Psest_3448	0.75	+1.9
3,620,135	+		Psest_3448	0.75	+2.7
3,620,135	+		Psest_3448	0.75	-0.4
3,620,136	-		Psest_3448	0.75	+2.4
3,620,136	-		Psest_3448	0.75	+1.5
3,620,303	+				-0.3
3,620,304	-				-0.0
3,620,304	-				+1.5