Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2743

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,933,882	-				-1.8
2,934,010	+				+2.0
2,934,126	-		Psest_2742	0.11	-0.2
2,934,182	+		Psest_2742	0.20	-0.3
2,934,182	+		Psest_2742	0.20	+0.6
2,934,182	+		Psest_2742	0.20	+0.2
2,934,183	-		Psest_2742	0.20	-0.2
2,934,183	-		Psest_2742	0.20	+0.6
2,934,183	-		Psest_2742	0.20	+0.1
2,934,188	+		Psest_2742	0.21	+1.1
2,934,188	+		Psest_2742	0.21	-0.8
2,934,189	-		Psest_2742	0.21	+0.6
2,934,189	-		Psest_2742	0.21	+1.4
2,934,189	-		Psest_2742	0.21	-0.4
2,934,311	+		Psest_2742	0.39	+0.8
2,934,311	+		Psest_2742	0.39	+2.6
2,934,354	-		Psest_2742	0.45	-1.2
2,934,354	-		Psest_2742	0.45	+0.6
2,934,467	+		Psest_2742	0.62	+1.7
2,934,517	-		Psest_2742	0.69	-1.2
2,934,608	+		Psest_2742	0.83	+0.3
2,934,608	+		Psest_2742	0.83	+0.4
2,934,609	-		Psest_2742	0.83	+0.3
2,934,609	-		Psest_2742	0.83	+2.9
2,934,609	-		Psest_2742	0.83	+0.6
2,934,609	-		Psest_2742	0.83	+1.1
2,934,609	-		Psest_2742	0.83	+0.1
2,934,609	-		Psest_2742	0.83	-0.3
2,934,609	-		Psest_2742	0.83	+0.7
2,934,609	-		Psest_2742	0.83	+0.5
2,934,609	-		Psest_2742	0.83	+0.0
2,934,614	+		Psest_2742	0.84	-1.1
2,934,615	-		Psest_2742	0.84	-0.4
2,934,615	-		Psest_2742	0.84	+1.0
2,934,615	-		Psest_2742	0.84	+1.8
2,934,615	-		Psest_2742	0.84	+0.2
2,934,789	+				+0.7
2,934,801	+				+0.3
2,934,844	+				-1.6
2,934,874	+		Psest_2743	0.13	-1.7
2,934,875	-		Psest_2743	0.13	+0.1
2,935,198	+		Psest_2743	0.56	-0.8
2,935,199	-		Psest_2743	0.56	+0.0
2,935,199	-		Psest_2743	0.56	-0.4
2,935,199	-		Psest_2743	0.56	-2.1
2,935,334	+		Psest_2743	0.74	-0.2
2,935,483	+				+0.8
2,935,483	+				-1.5
2,935,483	+				+0.1
2,935,483	+				-0.3
2,935,484	-				-1.3
2,935,484	-				+0.2
2,935,484	-				-0.1
2,935,486	+				-0.7
2,935,504	+				-0.7
2,935,504	+				-1.0
2,935,504	+				+0.1
2,935,505	-				-0.6
2,935,565	+				+1.3
2,935,565	+				-0.2
2,935,566	-				-0.2
2,935,566	-				+0.1
2,935,566	-				+0.1
2,935,566	-				-0.2
2,935,566	-				+0.3
2,935,599	+				+0.9
2,935,600	-				-0.5
2,935,600	-				+0.7
2,936,076	-		Psest_2744	0.88	+0.2
2,936,076	-		Psest_2744	0.88	-2.0
2,936,174	-				-0.1
2,936,247	+				-0.1
2,936,289	+				-1.1
2,936,289	+				-0.2
2,936,290	-				+1.7
2,936,290	-				+0.8
2,936,480	+		Psest_2745	0.32	+0.3