Experiment: 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2471 and Psest_2472 are separated by 430 nucleotides Psest_2472 and Psest_2473 are separated by 11 nucleotides
Psest_2471: Psest_2471 - Glycerol-3-phosphate dehydrogenase, at 2,640,446 to 2,641,468
_2471
Psest_2472: Psest_2472 - beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA, at 2,641,899 to 2,642,414
_2472
Psest_2473: Psest_2473 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 2,642,426 to 2,643,643
_2473
Position (kb)
2641
2642
2643 Strain fitness (log2 ratio)
-1
0
1
2 at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.661 kb on + strand at 2641.662 kb on - strand at 2641.663 kb on + strand at 2641.709 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.817 kb on + strand at 2641.817 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Hydroxymethylfurfural 5 mM remove 2,641,514 + -0.7 2,641,514 + -0.5 2,641,514 + +0.8 2,641,514 + -0.5 2,641,514 + -1.0 2,641,514 + +0.4 2,641,515 - +0.1 2,641,515 - -0.9 2,641,515 - -1.3 2,641,515 - -0.9 2,641,515 - -0.3 2,641,661 + +1.2 2,641,662 - +0.2 2,641,663 + +0.2 2,641,709 + -0.9 2,641,811 + +1.2 2,641,811 + -1.5 2,641,811 + +0.5 2,641,811 + -0.6 2,641,817 + -0.6 2,641,817 + +1.0 2,641,856 + -0.8 2,641,856 + -0.6 2,641,856 + -0.3 2,641,856 + +1.9 2,641,856 + +1.5 2,641,856 + +0.6 2,641,856 + -0.1
Or see this region's nucleotide sequence