Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2367

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,519,916	+		Psest_2366	0.26	+1.0
2,519,917	-		Psest_2366	0.26	+0.6
2,519,917	-		Psest_2366	0.26	+0.9
2,520,029	+		Psest_2366	0.37	+0.5
2,520,030	-		Psest_2366	0.37	+0.1
2,520,044	+		Psest_2366	0.39	-1.9
2,520,045	-		Psest_2366	0.39	+2.3
2,520,045	-		Psest_2366	0.39	-1.9
2,520,105	-		Psest_2366	0.45	+0.0
2,520,308	+		Psest_2366	0.65	+0.6
2,520,308	+		Psest_2366	0.65	-0.8
2,520,309	-		Psest_2366	0.65	+0.9
2,520,309	-		Psest_2366	0.65	+1.4
2,520,340	+		Psest_2366	0.68	+1.2
2,520,340	+		Psest_2366	0.68	+1.2
2,520,341	-		Psest_2366	0.68	-1.9
2,520,341	-		Psest_2366	0.68	-0.3
2,520,341	-		Psest_2366	0.68	-0.6
2,520,341	-		Psest_2366	0.68	-0.5
2,520,341	-		Psest_2366	0.68	+0.9
2,520,341	-		Psest_2366	0.68	+0.1
2,520,341	-		Psest_2366	0.68	-0.7
2,520,341	-		Psest_2366	0.68	-0.4
2,520,521	+		Psest_2366	0.85	+0.4
2,520,522	-		Psest_2366	0.86	-0.9
2,520,522	-		Psest_2366	0.86	-0.2
2,520,729	+				-0.8
2,520,730	-				+0.6
2,520,745	+				+0.0
2,520,745	+				-1.9
2,520,745	+				-1.4
2,520,745	+				+1.1
2,520,745	+				+0.2
2,520,745	+				-1.4
2,520,745	+				-0.2
2,520,745	+				+0.5
2,520,745	+				+1.1
2,520,746	-				-0.1
2,520,746	-				-0.2
2,520,746	-				+0.2
2,520,746	-				+0.6
2,520,746	-				+1.5
2,520,878	+				-0.2
2,520,879	-				+0.8
2,520,894	-				-1.9
2,520,894	-				+2.1
2,520,975	-		Psest_2367	0.12	+0.5
2,521,104	-		Psest_2367	0.21	+1.5
2,521,182	-		Psest_2367	0.27	-3.3
2,521,418	+		Psest_2367	0.44	-1.7
2,521,419	-		Psest_2367	0.44	-1.1
2,521,419	-		Psest_2367	0.44	-1.0
2,521,419	-		Psest_2367	0.44	-1.0
2,521,553	+		Psest_2367	0.54	+0.1
2,521,553	+		Psest_2367	0.54	+0.5
2,521,554	-		Psest_2367	0.54	-1.4
2,521,554	-		Psest_2367	0.54	-0.7
2,521,554	-		Psest_2367	0.54	-1.4
2,521,620	-		Psest_2367	0.59	-1.2
2,521,718	+		Psest_2367	0.66	-1.9
2,521,719	-		Psest_2367	0.66	-0.8
2,521,719	-		Psest_2367	0.66	-0.3
2,521,719	-		Psest_2367	0.66	-1.4
2,521,719	-		Psest_2367	0.66	-1.5
2,521,719	-		Psest_2367	0.66	-0.2
2,521,782	-		Psest_2367	0.71	-2.0
2,521,871	+		Psest_2367	0.78	+1.7
2,521,872	-		Psest_2367	0.78	-1.0
2,521,958	+		Psest_2367	0.84	-1.6
2,521,958	+		Psest_2367	0.84	-0.9
2,521,959	-		Psest_2367	0.84	+2.9
2,521,959	-		Psest_2367	0.84	+0.3
2,521,959	-		Psest_2367	0.84	-0.8
2,521,964	+		Psest_2367	0.84	-0.3
2,521,964	+		Psest_2367	0.84	+0.9
2,521,964	+		Psest_2367	0.84	-0.6
2,522,081	+				+2.1
2,522,081	+				+0.6
2,522,082	-				-1.8
2,522,159	+				+0.3
2,522,160	-				+1.6
2,522,303	+		Psest_2368	0.10	-1.0
2,522,303	+		Psest_2368	0.10	-0.4
2,522,303	+		Psest_2368	0.10	+0.9
2,522,303	+		Psest_2368	0.10	-3.5
2,522,304	-		Psest_2368	0.11	-0.4
2,522,304	-		Psest_2368	0.11	-0.2
2,522,304	-		Psest_2368	0.11	-1.2
2,522,304	-		Psest_2368	0.11	-1.1
2,522,304	-		Psest_2368	0.11	-2.2
2,522,304	-		Psest_2368	0.11	+0.3
2,522,304	-		Psest_2368	0.11	-0.9
2,522,327	+		Psest_2368	0.13	+0.2
2,522,327	+		Psest_2368	0.13	-2.0
2,522,327	+		Psest_2368	0.13	+0.8
2,522,328	-		Psest_2368	0.13	-0.2
2,522,328	-		Psest_2368	0.13	+1.7
2,522,328	-		Psest_2368	0.13	+0.9
2,522,328	-		Psest_2368	0.13	+1.5
2,522,369	+		Psest_2368	0.17	-0.3
2,522,370	-		Psest_2368	0.17	-0.5
2,522,370	-		Psest_2368	0.17	+0.6
2,522,405	+		Psest_2368	0.20	+0.4
2,522,406	-		Psest_2368	0.20	-0.3
2,522,406	-		Psest_2368	0.20	-2.0
2,522,406	-		Psest_2368	0.20	+1.1
2,522,627	+		Psest_2368	0.41	-0.8
2,522,627	+		Psest_2368	0.41	+0.2
2,522,627	+		Psest_2368	0.41	+1.7
2,522,627	+		Psest_2368	0.41	-1.3
2,522,628	-		Psest_2368	0.41	+0.2
2,522,628	-		Psest_2368	0.41	-0.4
2,522,628	-		Psest_2368	0.41	+0.5
2,522,628	-		Psest_2368	0.41	+0.8
2,522,628	-		Psest_2368	0.41	-2.2
2,522,764	-		Psest_2368	0.54	+0.6
2,522,764	-		Psest_2368	0.54	+0.5
2,522,764	-		Psest_2368	0.54	+2.0
2,522,907	-		Psest_2368	0.67	-2.0
2,523,000	-		Psest_2368	0.76	+0.1
2,523,025	+		Psest_2368	0.78	+1.0
2,523,025	+		Psest_2368	0.78	+0.6
2,523,025	+		Psest_2368	0.78	+0.2
2,523,025	+		Psest_2368	0.78	+0.2
2,523,025	+		Psest_2368	0.78	+0.4
2,523,025	+		Psest_2368	0.78	-0.8
2,523,025	+		Psest_2368	0.78	-0.5
2,523,025	+		Psest_2368	0.78	+0.3
2,523,025	+		Psest_2368	0.78	-1.6
2,523,025	+		Psest_2368	0.78	+1.7
2,523,025	+		Psest_2368	0.78	-1.2
2,523,025	+		Psest_2368	0.78	+0.7
2,523,025	+		Psest_2368	0.78	-1.3
2,523,025	+		Psest_2368	0.78	+2.0
2,523,025	+		Psest_2368	0.78	+1.4
2,523,026	-		Psest_2368	0.78	-0.4
2,523,026	-		Psest_2368	0.78	-1.8
2,523,026	-		Psest_2368	0.78	-2.4
2,523,026	-		Psest_2368	0.78	+0.1
2,523,026	-		Psest_2368	0.78	-0.3
2,523,026	-		Psest_2368	0.78	-0.6
2,523,026	-		Psest_2368	0.78	+2.6
2,523,026	-		Psest_2368	0.78	+0.6
2,523,026	-		Psest_2368	0.78	-0.7
2,523,026	-		Psest_2368	0.78	+0.2
2,523,026	-		Psest_2368	0.78	+1.4
2,523,026	-		Psest_2368	0.78	-2.9
2,523,026	-		Psest_2368	0.78	-0.2
2,523,026	-		Psest_2368	0.78	-1.1
2,523,026	-		Psest_2368	0.78	-0.6
2,523,026	-		Psest_2368	0.78	+0.8
2,523,026	-		Psest_2368	0.78	-0.4
2,523,026	-		Psest_2368	0.78	-0.0
2,523,026	-		Psest_2368	0.78	+1.2
2,523,026	-		Psest_2368	0.78	-1.4
2,523,026	-		Psest_2368	0.78	-1.7
2,523,032	+		Psest_2368	0.79	+0.4
2,523,032	+		Psest_2368	0.79	+0.4
2,523,033	-		Psest_2368	0.79	+0.3
2,523,097	-		Psest_2368	0.85	+0.3