Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2246

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,396,304	+		Psest_2244	0.39	+0.9
2,396,304	+		Psest_2244	0.39	-1.1
2,396,304	+		Psest_2244	0.39	+1.1
2,396,304	+		Psest_2244	0.39	-2.6
2,396,304	+		Psest_2244	0.39	-0.3
2,396,304	+		Psest_2244	0.39	+1.9
2,396,304	+		Psest_2244	0.39	+0.1
2,396,304	+		Psest_2244	0.39	+1.9
2,396,304	+		Psest_2244	0.39	-0.7
2,396,304	+		Psest_2244	0.39	-1.0
2,396,304	+		Psest_2244	0.39	+0.8
2,396,304	+		Psest_2244	0.39	+0.6
2,396,305	-		Psest_2244	0.39	-0.9
2,396,305	-		Psest_2244	0.39	-0.3
2,396,305	-		Psest_2244	0.39	-2.1
2,396,305	-		Psest_2244	0.39	-1.4
2,396,325	+		Psest_2244	0.45	+0.8
2,396,325	+		Psest_2244	0.45	-0.8
2,396,325	+		Psest_2244	0.45	-2.0
2,396,326	-		Psest_2244	0.46	+0.2
2,396,326	-		Psest_2244	0.46	-1.1
2,396,410	+		Psest_2244	0.71	-0.9
2,396,410	+		Psest_2244	0.71	-1.0
2,396,410	+		Psest_2244	0.71	-0.3
2,396,410	+		Psest_2244	0.71	-1.0
2,396,410	+		Psest_2244	0.71	-1.5
2,396,411	-		Psest_2244	0.72	+1.7
2,396,411	-		Psest_2244	0.72	-0.7
2,396,436	+		Psest_2244	0.79	+0.9
2,396,437	-		Psest_2244	0.80	+1.1
2,396,494	+				+0.2
2,396,980	-				-0.0
2,396,995	+				+1.0
2,396,995	+				+2.0
2,396,995	+				-0.7
2,396,995	+				+0.8
2,396,996	-				+0.8
2,396,996	-				-0.5
2,397,103	+		Psest_2246	0.11	-0.9
2,397,173	-		Psest_2246	0.20	+3.0
2,397,176	-		Psest_2246	0.21	+0.2
2,397,176	-		Psest_2246	0.21	-0.1
2,397,607	+		Psest_2246	0.81	+0.1
2,397,607	+		Psest_2246	0.81	+0.7
2,397,631	+		Psest_2246	0.85	+1.4
2,397,632	-		Psest_2246	0.85	+1.2
2,397,741	+				-0.7
2,397,742	-				-0.4
2,397,755	+				+0.5
2,397,756	-				-1.5
2,397,756	-				+0.4
2,397,756	-				+0.4
2,397,858	-		Psest_2247	0.24	+0.4
2,397,896	+		Psest_2247	0.31	+0.7
2,397,897	-		Psest_2247	0.31	-0.1
2,398,058	-		Psest_2247	0.63	+0.2
2,398,058	-		Psest_2247	0.63	-0.5
2,398,059	+		Psest_2247	0.64	-1.8
2,398,059	+		Psest_2247	0.64	-1.4
2,398,059	+		Psest_2247	0.64	+0.8
2,398,059	+		Psest_2247	0.64	+1.0
2,398,059	+		Psest_2247	0.64	-0.9
2,398,059	+		Psest_2247	0.64	+2.5
2,398,059	+		Psest_2247	0.64	-0.6
2,398,060	-		Psest_2247	0.64	-0.4
2,398,060	-		Psest_2247	0.64	-0.1
2,398,060	-		Psest_2247	0.64	+0.7
2,398,060	-		Psest_2247	0.64	-0.8
2,398,060	-		Psest_2247	0.64	+1.1
2,398,060	-		Psest_2247	0.64	+0.8
2,398,060	-		Psest_2247	0.64	-0.7
2,398,060	-		Psest_2247	0.64	-1.8
2,398,293	-		Psest_2248	0.11	+1.2
2,398,293	-		Psest_2248	0.11	+1.9
2,398,400	-		Psest_2248	0.41	-0.6
2,398,581	+				+0.8
2,398,581	+				-0.5
2,398,589	+				-1.4
2,398,589	+				+0.5
2,398,589	+				-0.8
2,398,590	-				+0.6
2,398,614	+				+3.0
2,398,615	-				+0.9
2,398,615	-				+0.9
2,398,666	+		Psest_2249	0.11	+0.5
2,398,666	+		Psest_2249	0.11	+0.5
2,398,666	+		Psest_2249	0.11	-0.1
2,398,666	+		Psest_2249	0.11	-1.4
2,398,666	+		Psest_2249	0.11	-2.0
2,398,667	-		Psest_2249	0.11	+0.9
2,398,667	-		Psest_2249	0.11	-0.9
2,398,667	-		Psest_2249	0.11	-0.6
2,398,667	-		Psest_2249	0.11	-1.6
2,398,667	-		Psest_2249	0.11	+1.1
2,398,667	-		Psest_2249	0.11	-1.6
2,398,739	+		Psest_2249	0.29	+0.3
2,398,739	+		Psest_2249	0.29	-0.6
2,398,740	-		Psest_2249	0.29	+1.4